Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq3 100 7e-16 >seq3 Length=3158035 Score = 100 bits (110), Expect = 7e-16 Identities = 137/189 (72%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 104372 TTCTGAATATTATAGTCAGATAGAGTTCT-ACCGTCTTCTAGTTGTTTTCCAGCAAAAAT 104430 ||||| || || ||||| | | || | | ||||||||| || || || ||||| || || Sbjct 1903400 TTCTGGATGTTGTAGTC-GCTCAAGGTGTGACCGTCTTCCAGCTGCTTACCAGCGAAGAT 1903458 Query 104431 TAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTC 104490 || | ||| || ||||| || || || ||||| ||||||||||| | || || || || Sbjct 1903459 TAAGCGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGAATCTTGGACTTGACGTTGTC 1903518 Query 104491 TACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550 | ||| ||| || ||| |||| || ||||| ||||| || || || || || || || Sbjct 1903519 GATGGTGTCGGAAGATTCCACCTTAAGGGTAATTGTCTTGCCGGTGAGAGTCTTGACGAA 1903578 Query 104551 TATCTGCAT 104559 ||||| || Sbjct 1903579 AATCTGTAT 1903587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397470605604