Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq7 93.3 4e-14
seq3 87.8 2e-12
>seq7
Length=2414983
Score = 93.3 bits (102), Expect = 4e-14
Identities = 140/199 (70%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594
|||||| || |||||||| || | | ||| | ||||||||||||||||| || |
Sbjct 819871 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAA 819812
Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654
|| || |||||||| ||| || | | ||||||||| || || ||||| |
Sbjct 819811 GATCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 819752
Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714
| ||||| |||| ||||||| ||| | || || || || || ||||| || || ||
Sbjct 819751 GTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 819692
Query 48715 AAAAATCTGCATCGTGTCT 48733
|||||||||||| || ||
Sbjct 819691 GAAAATCTGCATCTTGCCT 819673
>seq3
Length=3158035
Score = 87.8 bits (96), Expect = 2e-12
Identities = 142/200 (71%), Gaps = 6/200 (3%)
Strand=Plus/Plus
Query 48530 GTGCTCTCCTTTTGAATGTTGTAATCAGCCAAT-TGTCGCTCGTCCTCCAGCTGCTTACC 48588
||||||| ||| || |||||||| || ||| ||| | |||| ||||||||||||||
Sbjct 1903391 GTGCTCTTCTTCTGGATGTTGTAGTCGCTCAAGGTGTGAC-CGTCTTCCAGCTGCTTACC 1903449
Query 48589 GCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTT 48648
|| | ||||| |||||||| || || | | || |||||| ||| || |||
Sbjct 1903450 AGCGAAGATTAAGCGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGAATCTTGGACTT 1903509
Query 48649 GA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGA 48706
|| | | || ||||| |||| ||| ||| || | || || || || |||||||||
Sbjct 1903510 GACGTTGTCG--ATGGTGTCGGAAGATTCCACCTTAAGGGTAATTGTCTTGCCGGTGAGA 1903567
Query 48707 GTTTTCACAAAAATCTGCAT 48726
|| || || |||||||| ||
Sbjct 1903568 GTCTTGACGAAAATCTGTAT 1903587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421250876558063
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |