Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq9 113 7e-21
seq11 107 3e-19
>seq9
Length=2050102
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| |||||
Sbjct 45620 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCCGCTAT 45678
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 45679 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 45719
>seq11
Length=1727864
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| || | |||| ||||| || ||||| || || ||||||||||| |||||
Sbjct 1302607 GCCAAGCGTCACCGAAAGATC-CTTCGTGACAACATTCAGGGCATCACCAAGCCTGCTAT 1302549
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 1302548 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 1302508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075142398659
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |