Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 365 1e-95 >seq4 Length=2906552 Score = 365 bits (404), Expect = 1e-95 Identities = 1078/1640 (66%), Gaps = 54/1640 (3%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| || ||| | || || ||| ||| || || || | | | ||| |||| || Sbjct 973170 TTCACCCATGCCTCCCCCACCCTGTTCAACGCAGGTACCCCGCAGGCCCAGCTGTCCTCA 973229 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| | | | |||||||||||| ||| |||||||||| ||||| || |||| Sbjct 973230 TGCTTCTTGGTCGACATGAAGGACGATAGCATTGAGGGTATCTACGACACTCTGAAGACA 973289 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | |||||||||| || || || ||||| | | || ||||| | ||||| Sbjct 973290 TGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTGAACG-TCCACCGCATCCGTGC 973348 Query 363726 -ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | | ||||||| ||||| || ||| || || | |||||||||||| Sbjct 973349 CACCGG-CTCTTACATTGCTGGCACCAACGGTACCTCTAACGGTATTATTCCCATGCTTC 973407 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | ||||| |||| ||||| || || ||||| |||||||| ||||| || || | Sbjct 973408 GAGTGTTCAACAACACTGCCAGATATGTCGATCAGGGTGGTAACAAGCGTCCTGGTGCCT 973467 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 |||| || || |||||||| || ||||| | |||||||| ||||| ||||| || | Sbjct 973468 TTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGA 973527 Query 363905 AC-ACGGGAA--AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTG 363961 || |||| || |||||| | || || ||||| ||||| ||| || ||| || | | Sbjct 973528 ACCACGGCAAGGAAGAGG---TCCGCGCCCGTGACTTGTTCCTTGCTCTCTGGATTCCCG 973584 Query 363962 ACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAA-TTGGTC---ACTCT--TTTGCCCAC 364015 | | || |||||||| || || ||||| |||| | || || | ||||| Sbjct 973585 ATCTCTTCATGAAGCGTGTTGAA------AAGAACTTGGACTGGACGCTGATGTGCCCCA 973638 Query 364016 ACGAATGTCCAGGTCTTTCCGA-TG-TATGGGGTGACGACTATGTTGCTCTATACGAAAA 364073 ||||||| || || ||| | || || ||||| | | || | | ||| | || || || Sbjct 973639 ACGAATGCCCTGGCCTTGCTGACTGCTATGGCGAG--GAATTCGAGGCTTTGTATGAGAA 973696 Query 364074 GTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCAT 364133 |||||| ||||||| | ||| | ||| || | ||| |||||||| |||| | |||| Sbjct 973697 GTATGAGAAGGAGGGACGTGGTCGCACGACCATCCGCGCCCAGAAGCTGTGGTATTCCAT 973756 Query 364134 CATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCG 364193 | |||| | |||| |||||| || | |||| ||| | ||||| ||| | |||||||| Sbjct 973757 CCTGGAAGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACAAGGATGCCTGCAACCG 973816 Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTA 364252 |||| ||||||| || |||| || || | || |||| |||||| || |||||||||| Sbjct 973817 CAAGAGCAACCAGAAGAACCTGGGAACCA-TCCGCAGCTCCAACCTCTGCACCGAGATTA 973875 Query 364253 TTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGG 364312 | || ||| ||||| || ||| ||| || || ||| | || || | || || || | Sbjct 973876 TCGAGTACTGTGCTCCAGATGAGGTTGCTGTTTGCAACTTGGCCTCTTTGGCCCTCCCTG 973935 Query 364313 CGTTTGT------AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATC 364366 | | ||| || || || | |||| || | ||| |||| || ||| | Sbjct 973936 CTTATGTCGATTACAACGAAGGCTGCTATGACTTTAAGAAGCTTCATGAAGTCACCAAGG 973995 Query 364367 ATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCG 364426 | | |||| ||| ||||| | || || ||| | || || | | || ||| Sbjct 973996 TGGTTGTCCGCAACCTCAACAAGATCATTGATGTCAATCACTACCCTGTCCAGGAGGCCC 974055 Query 364427 AGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTT 364486 || ||||| || || || |||||| ||||||| ||||| || || |||| || Sbjct 974056 GCAACAGCAACATGCGCCACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTT 974115 Query 364487 TTATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCT 364546 | | || ||| | ||||| || || || |||||| || || ||| |||||| Sbjct 974116 TCCTTGCCCTGCGCATGCCCTTTGAGTCTCCCGAGGCTCGTCAGCTGAACAAGCAGATCT 974175 Query 364547 TTGAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGG-GA 364605 |||| || || || ||| || | ||||| | ||| | |||||| | Sbjct 974176 TTGAGACCATCTACCATGCGGCCCTTGAGGCTTC------TATGGAGATCGCCAAGGTGG 974229 Query 364606 AAGTACTCTACTTAT-----GAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATC 364660 | | | |||| || |||| || ||| || |||| | |||| || || Sbjct 974230 AGGGTCCCTACGAATCATTCAAGGGATCACCTGCATCCGAGGGCATCCTCCAATTCGACA 974289 Query 364661 TATGGAATGTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAG 364719 | ||| |||||| ||| |||| || ||| | ||||| |||| | | | | | ||| Sbjct 974290 TGTGGGATGTCAAGCCCTCTGACCTGTGGGAGTGGGACTCGCTCAAGGAGC-AGATCAAG 974348 Query 364720 AAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAG 364779 |||| ||||| |||||| | | | || || ||||| || || ||| | ||| Sbjct 974349 GAGCACGGTACGCGCAACAGCTTGCTCCTCGCCCCTATGCCAACTGCCAGTACGTCCCAG 974408 Query 364780 ATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTT 364839 || || || ||||||||||||||||| || | || ||| | || || || || Sbjct 974409 ATTCTGGGCAACAACGAGTGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTC 974468 Query 364840 CTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGG 364899 ||| |||| || || | || || || | || ||||||| || |||| ||| Sbjct 974469 CTTGCCGGCGAGTTCCAAGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGC 974528 Query 364900 CTGTGGGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATT 364959 || ||| || |||||||||| |||||| || | || || || | |||||||| Sbjct 974529 CTCTGGTCCGATGCCATGAAGAACCGTATCATTGCTGAGAACGGCTCCATTCAGAACATC 974588 Query 364960 CCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCG- 365018 || | || |||||| | ||| | ||||||| ||||| ||||| ||||| ||| Sbjct 974589 CCCAACATCCCCGAAGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGC 974648 Query 365019 --AACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTT 365076 || | || | ||||| || ||||| |||||||| || |||| |||||| | Sbjct 974649 CAAATTGTC---CAGATGGCAGCTGATCGTGGTGCTTTCATTGATCAGTCCCAGTCCCTG 974705 Query 365077 AACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGG 365136 ||| | ||||| | || || | |||| |||| |||||| ||| || ||| Sbjct 974706 AACATCCACATGAAGGATCCCACAATGGGCAAGATTACCAGCATGCACTTCACTGGCTGG 974765 Query 365137 AAATCCGGTCTTAAGACAGG 365156 || ||||| ||||| || Sbjct 974766 AAGCTTGGTCTCAAGACCGG 974785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352547949266