Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq4 163 3e-35
seq7 116 3e-21
seq3 107 2e-18
seq2 98.7 9e-16
>seq4
Length=2906552
Score = 163 bits (180), Expect = 3e-35
Identities = 919/1444 (64%), Gaps = 43/1444 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| || || ||||||||||| | ||||| ||| || | ||| || ||| ||||
Sbjct 974494 TTGACAACTTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGC 974435
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| |||||||| || || | || | || || ||||| || |
Sbjct 974434 TCGAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGG 974375
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || |||||| ||||||| |||||| | ||||| |||| |||| |||||
Sbjct 974374 AGCAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCAC 974315
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTC-GCTGGCGGGGCT 145296
|| || ||| | || |||||||||||| | || | |||||||| | || || | |
Sbjct 974314 AGGTCAGAGGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGAT 974255
Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGC 145356
||||| || || ||| ||| ||||||| ||| | ||||| || ||
Sbjct 974254 CCCTTG-AATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGC 974196
Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416
| || || ||||| || ||| |||| ||| | || || ||| |
Sbjct 974195 CGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAA 974136
Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476
||||||||||| | ||||| ||||| || ||||| | || || || ||||| ||
Sbjct 974135 GGGCATGCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCG 974076
Query 145477 ATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTT 145536
|| ||||||||| | | ||| || || ||| || |||| || || || ||
Sbjct 974075 GTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTT 974016
Query 145537 ATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGC 145596
|| | ||| || || || ||||| || | | | | ||| | ||||||| | | |||
Sbjct 974015 GTTGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGC-AGC 973957
Query 145597 C----TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCG 145652
| | || | ||| || | ||| | || ||| | || ||||| || ||||| ||
Sbjct 973956 CTTCGTTGTAATCGA-CATA-AGC-AGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAA 973900
Query 145653 TCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTC 145712
||| || | | | ||| | | ||||||| ||| | ||| | ||||||||
Sbjct 973899 CCTCATCTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTC 973840
Query 145713 CCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGC 145772
|||| || | ||| || || || | |||||| || ||||||||||||||| | || |
Sbjct 973839 CCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTAC 973780
Query 145773 CAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGCTGCT 145832
||||||| ||| | |||| ||| || || | ||| || || | || | |
Sbjct 973779 CAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGGGCGCGGA--TGGTCGT 973722
Query 145833 GGTA--GCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCA 145890
| | || ||||| | || || ||| || | |||| || | || |||||
Sbjct 973721 GCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCCATAGCA 973662
Query 145891 ATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGAC 145950
|| | ||||| || || | |||||| |||||||||| ||| | ||| | ||
Sbjct 973661 GTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTCCAAGTTCTTTTCAAC 973602
Query 145951 GCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATC 146010
|||| ||| || | ||| || | ||| || || | |||||| || || || |
Sbjct 973601 ACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGC---GCGGAC 973545
Query 146011 CTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACT-ATAGATGTCCGCGTGCCAC 146065
||| | || || ||| || | || ||| | ||| | ||| ||| ||||||||
Sbjct 973544 CTCTTCCTTGCCGTGGTTCTTGC-GGAGATCAAGGA-ACTCAAAGACGTCGGCGTGCCAG 973487
Query 146066 GGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGT 146122
|| || | |||| ||| | ||| || || ||| |||||||| || || | |
Sbjct 973486 GGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTG 973427
Query 146123 ACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGT---A 146179
| ||||||| || || || | |||||| | ||| | | ||||| || |
Sbjct 973426 GCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCA 973367
Query 146180 G-AGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-GC 146237
| | | || | |||| || || | || || || |||| ||| | ||| || ||
Sbjct 973366 GCAATGTA----AGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGC 973311
Query 146238 CGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATCG 146296
| | |||||| || ||| || ||| | || || |||||||| || ||||||||||||
Sbjct 973310 CAT-CTTGGAAATCATGGCACATGTCTTC-AGAGTGTCGTAGATACCCTCAATGCTATCG 973253
Query 146297 --CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGA 146354
|||| ||| ||| || ||||| ||| ||| ||| ||| ||| || || || ||
Sbjct 973252 TCCTTC--ATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGA 973195
Query 146355 ACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATAG 146414
||| || ||| || || || || | || | | ||| | || || || |
Sbjct 973194 ACAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGA 973135
Query 146415 CGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCC 146474
| | |||||| || || ||||| | || || ||||| | |||||| || ||||
Sbjct 973134 CACGCTCAATGTCATCTCCCCAGATGCCAACAGACACTCGCATAATCATGTGCTGTGGCC 973075
Query 146475 GCTC 146478
||||
Sbjct 973074 GCTC 973071
>seq7
Length=2414983
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | ||| |||||||| || |||||||| |||
Sbjct 819906 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 819847
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || ||||| |||||||| || ||| |||| || |||||||||||||| ||
Sbjct 819846 AGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGA 819787
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || |||| ||||| |
Sbjct 819786 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACC 819727
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||||||||||||
Sbjct 819726 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 819680
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || |||||||| ||| |
Sbjct 116160 CCACCACGAAGGCGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 116101
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||| || |||||||| ||| | || | |||||||||||| |||||
Sbjct 116100 AGAGTTCGGCCATCCTCGAGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGA 116041
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | || | ||||||| ||||| |
Sbjct 116040 ATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTATCGGAAGACTCCACC 115981
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| ||| | ||| || ||||| || || || ||||| || ||||||
Sbjct 115980 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTGCATG 115933
Score = 100 bits (110), Expect = 3e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | |||||| || || || | || |||||| || |||||||| |||||
Sbjct 116546 GCCACCACGAAGACGCAGAACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCGCT 116487
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| |||||| ||| || |||||||| || || |||| || ||||||||||| |||||
Sbjct 116486 CAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGG 116427
Query 131127 GATTCCTTCTTTGTC 131141
|| || || |||||
Sbjct 116426 AATACCCTCCTTGTC 116412
>seq3
Length=3158035
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102
|| ||| || |||||||| ||||||| |||| | ||| || |||||||| || ||| |
Sbjct 1903396 CTTCTTCTGGATGTTGTAGTCGCTCAAGGTGTGACCGTCTTCCAGCTGCTTACCAGCGAA 1903455
Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162
|||||| ||||||||||| || || || || |||||||| || || ||||| |
Sbjct 1903456 GATTAAGCGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGAATCTTGGACTTGACGTT 1903515
Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222
|| | || |||| || || | | | ||||| || || ||||| ||||| || ||
Sbjct 1903516 GTCGATGGTGTCGGAAGATTCCACCTTAAGGGTAATTGTCTTGCCGGTGAGAGTCTTGAC 1903575
Query 131223 GAAAATCTGCAT 131234
||||||||| ||
Sbjct 1903576 GAAAATCTGTAT 1903587
>seq2
Length=3541710
Score = 98.7 bits (108), Expect = 9e-16
Identities = 131/182 (72%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | |||||| ||||| ||||||||||| || |||
Sbjct 89114 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 89055
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 89054 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 88995
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 88994 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 88935
Query 131225 AA 131226
||
Sbjct 88934 AA 88933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472012428289920
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