Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq34 140 2e-28
seq8 96.9 2e-15
>seq34
Length=4335
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 672 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 731
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 732 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 766
>seq8
Length=2103943
Score = 96.9 bits (106), Expect = 2e-15
Identities = 197/293 (67%), Gaps = 0/293 (0%)
Strand=Plus/Minus
Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254
|| || |||||||||||||| ||| |||| || ||||| | || || ||||| |||
Sbjct 462807 GATGCCTTCTACCGCTACAAGATGGAGCGCCTCCAGACCAAGATTGAAGGCAAGGGTAAC 462748
Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314
||||| || ||||| | |||||| || | ||||| || | || | ||||| |
Sbjct 462747 GGTATCAAGACCGTTGTCGTCAACTTGTCCAGCGTCGCCCAGTCTCTTGCCCGCCCCGGT 462688
Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374
| || | || || || || | ||| || || |||||||| | | || | |||
Sbjct 462687 TCTTATGTCATCAAGTACTTTGGTTTCGAGCTCGGAGCTCAGACCAACATCGACCCCAAG 462628
Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434
|||| || | ||| | ||||| | || | | || |||||||||||| || ||
Sbjct 462627 GACGACCGTTGGATCATCAACGGCGCCCACGATGCCGCAAAGCTGCAGGACCACCTCGAT 462568
Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487
||||| || ||||||||| || || | ||| | ||||| ||||||||
Sbjct 462567 GGCTTCATCAACAAGTTTGTTCTCTGCAAAAAGTGCAAGAACCCTGAGACCGA 462515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334946942823353
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |