Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq8 158 2e-33
seq4 129 7e-25
>seq8
Length=2103943
Score = 158 bits (174), Expect = 2e-33
Identities = 372/558 (67%), Gaps = 8/558 (1%)
Strand=Plus/Minus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| || || ||| ||| ||||||||||| | | || | ||||||||||| || ||
Sbjct 374015 CAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGA 373956
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|| ||||| || || ||||| || ||||| || ||||| ||||| | || |||||
Sbjct 373955 CCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 373896
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCGCTGTCATGT 32837
|| || || || || |||||||||| || | || || || | |||| ||
Sbjct 373895 ATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGG 373836
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897
|||||||| ||||| ||||||||||| | ||||| || ||||| || || ||
Sbjct 373835 ATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTG 373776
Query 32898 AAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATT 32957
||||| ||| | | | | || || | || ||||| || | || || |
Sbjct 373775 AAGAGGTAGCTGCGCTGGCTGTTCTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTC 373716
Query 32958 TCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATC 33017
|| || || ||||| || || || || || ||||||||||||| |||||||| |||
Sbjct 373715 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATC 373656
Query 33018 TGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCA 33077
|| || || || ||| || || | | || || || || || || ||| ||| |||
Sbjct 373655 TGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCA 373596
Query 33078 AAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTA---GTTTATTCCA 33133
|| || |||| | || || || || || ||||| | || | | | || |||||
Sbjct 373595 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGT-TCAGGCGGTTGTTCCA 373537
Query 33134 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 33193
|| | | ||| || || | ||| | ||||| | ||||| || || ||||| |||||
Sbjct 373536 GTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGCCTT 373477
Query 33194 TTTATACATATTCCAGAT 33211
|| ||||| | ||||||
Sbjct 373476 CTTGTACATTTGCCAGAT 373459
>seq4
Length=2906552
Score = 129 bits (142), Expect = 7e-25
Identities = 454/702 (65%), Gaps = 14/702 (2%)
Strand=Plus/Minus
Query 63020 AGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 63079
|| ||||| ||||| | || ||||||| || ||| || || | | || || |||
Sbjct 973654 AGGCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTCCAAGTTCTTTTCAACACGCTTC 973595
Query 63080 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 63139
|| |||||||| |||||||| ||||| | || | || | || | || || ||
Sbjct 973594 ATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTG 973535
Query 63140 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 63199
|| ||||| ||||| |||||| | | | || | ||||| || || | |||
Sbjct 973534 CCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAG 973475
Query 63200 ATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 63259
||||| | | ||||| || ||||| || |||||||| | ||||| || ||||| ||
Sbjct 973474 ATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTG 973415
Query 63260 TAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTT 63319
| |||| | ||| ||||||||||| || || ||||| ||||| || | || ||
Sbjct 973414 AACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAG 973355
Query 63320 CCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| ||||||| || | || | || || || || || ||||| || || || |
Sbjct 973354 CCGGTGGCACGGATGCGGTGGACGTTCA-AG-CCAATACCACCAGCCATCTTGGAAATCA 973297
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| ||| || | || || ||||| ||||| || ||||| ||| |||||| | |
Sbjct 973296 TGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCA 973237
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
|| || |||| ||| | || || || || || | ||| || || || |
Sbjct 973236 AGAAGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCAT 973177
Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTC----AATAGCTGAGTCT-ATATC 63552
| || || | || || | || ||||| ||||| | ||| | | | || ||
Sbjct 973176 GGGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCATCTC 973117
Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612
|| |||| || || | || ||||| | ||||||||| || | ||||| |||||
Sbjct 973116 CC-CAGATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTT 973062
Query 63613 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 63672
| | | |||| | ||| || ||||||||| || || || || || | |||
Sbjct 973061 GCCATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTT 973002
Query 63673 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTT 63714
|||||||| ||||| | |||| | |||| ||| | |||||
Sbjct 973001 GAAGTCTCGATCGTAGACAATAGCGGAGTCGAGCTCCTCCTT 972960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631501014800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |