Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq8 215 6e-51
>seq8
Length=2103943
Score = 215 bits (238), Expect = 6e-51
Identities = 495/734 (67%), Gaps = 25/734 (3%)
Strand=Plus/Minus
Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA-CGTA 92984
||| || || || || |||||||| ||||| | | ||||| || || || || |
Sbjct 374181 ATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGGAGGGCGCA 374122
Query 92985 CAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT- 93043
||| ||||| ||||||||||| |||| ||| ||| || || || | | ||| ||
Sbjct 374121 -AGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATGTCAC 374063
Query 93044 --ATTACTCTACTATTTGGTG--GTTTTTGTACGACATAATTGTACATTAAGCACGCAAA 93099
|| ||| | || ||| | ||| ||| | | | || || | ||| |||||
Sbjct 374062 GGATCACT-TCCTTGCTGGCGCGGTTCTTG----AGGTGAGAGTGCAGCAGGCAGGCAAA 374008
Query 93100 GTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAA 93159
|||||| || | ||| ||||| || || || | ||| ||| || || | ||| || |
Sbjct 374007 GTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGGCAT 373948
Query 93160 CAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTC 93219
|| ||||| ||||||||||| || || || ||||| ||| || || ||||| ||
Sbjct 373947 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTC 373888
Query 93220 CACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--CT-GATCCA 93276
||||| ||||| || || | || | |||||| | || || || || ||||||
Sbjct 373887 AACGGCGGCAAAGGCAACCAGGCGCTGGGCAAA---GGAAGAGTTCTTGTCCTGGATCCA 373831
Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336
|| | ||||| ||||| || || ||| ||||| | || || || ||||| || ||
Sbjct 373830 CTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAG 373771
Query 93337 GTAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGATTAACAGAGAATACATTTCA 93394
||| |||| | | |||| | ||||| |||||||| | ||| || || | ||
Sbjct 373770 GTAGCTGCGCTGG--CTGTTCTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTCG 373713
Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGC 93454
|| |||| |||||||| || ||||| |||||||| |||| ||| || | ||||||
Sbjct 373712 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGG 373653
Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514
|| || | ||| | ||| || || || || ||||| || ||||| || || |||||
Sbjct 373652 ACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAG 373593
Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCG 93571
|| |||| || || || || | ||||| ||||| || | | || | ||| |||
Sbjct 373592 AAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCG 373533
Query 93572 GATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTG 93631
||||| || || ||||| | |||||| | ||||| || || || || || || |||
Sbjct 373532 TGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 373473
Query 93632 TACATATCCCATAT 93645
||||| | ||| ||
Sbjct 373472 TACATTTGCCAGAT 373459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860361472120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |