Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq8 215 6e-51 >seq8 Length=2103943 Score = 215 bits (238), Expect = 6e-51 Identities = 495/734 (67%), Gaps = 25/734 (3%) Strand=Plus/Minus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGA-CGTA 92984 ||| || || || || |||||||| ||||| | | ||||| || || || || | Sbjct 374181 ATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGGAGGGCGCA 374122 Query 92985 CAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCT- 93043 ||| ||||| ||||||||||| |||| ||| ||| || || || | | ||| || Sbjct 374121 -AGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATGTCAC 374063 Query 93044 --ATTACTCTACTATTTGGTG--GTTTTTGTACGACATAATTGTACATTAAGCACGCAAA 93099 || ||| | || ||| | ||| ||| | | | || || | ||| ||||| Sbjct 374062 GGATCACT-TCCTTGCTGGCGCGGTTCTTG----AGGTGAGAGTGCAGCAGGCAGGCAAA 374008 Query 93100 GTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAA 93159 |||||| || | ||| ||||| || || || | ||| ||| || || | ||| || | Sbjct 374007 GTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGGCAT 373948 Query 93160 CAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTC 93219 || ||||| ||||||||||| || || || ||||| ||| || || ||||| || Sbjct 373947 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTC 373888 Query 93220 CACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG--CT-GATCCA 93276 ||||| ||||| || || | || | |||||| | || || || || |||||| Sbjct 373887 AACGGCGGCAAAGGCAACCAGGCGCTGGGCAAA---GGAAGAGTTCTTGTCCTGGATCCA 373831 Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336 || | ||||| ||||| || || ||| ||||| | || || || ||||| || || Sbjct 373830 CTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAG 373771 Query 93337 GTAATCTCGCTCGTCCGAATCTCGT--ATGTATGTATCGATTAACAGAGAATACATTTCA 93394 ||| |||| | | |||| | ||||| |||||||| | ||| || || | || Sbjct 373770 GTAGCTGCGCTGG--CTGTTCTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTCG 373713 Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGC 93454 || |||| |||||||| || ||||| |||||||| |||| ||| || | |||||| Sbjct 373712 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTGG 373653 Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514 || || | ||| | ||| || || || || ||||| || ||||| || || ||||| Sbjct 373652 ACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAG 373593 Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCG 93571 || |||| || || || || | ||||| ||||| || | | || | ||| ||| Sbjct 373592 AAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCG 373533 Query 93572 GATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTG 93631 ||||| || || ||||| | |||||| | ||||| || || || || || || ||| Sbjct 373532 TGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTG 373473 Query 93632 TACATATCCCATAT 93645 ||||| | ||| || Sbjct 373472 TACATTTGCCAGAT 373459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860361472120