Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq8 412 7e-110
seq4 343 3e-89
>seq8
Length=2103943
Score = 412 bits (456), Expect = 7e-110
Identities = 618/862 (72%), Gaps = 32/862 (4%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| |||||||||||| |||||||| |||
Sbjct 373459 ATCTGGCAAATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAAGAGATTGATCTG 373518
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGA--GA--ACGAAAAGTTTTTCCTCAA 42415
||||||| | || |||| | || | |||| || |||| |||| ||| ||
Sbjct 373519 TCCAAGGATCTGCACGACTGGAACA-ACCGCCTGAACGATGACGAGAAGTACTTCATCTC 373577
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| ||||||||||| ||||||||||| ||||| ||||| |||||||||| | |
Sbjct 373578 TCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATTGTCAACGAGAACCTGGTCGAGCG 373637
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|| | ||||| ||| | ||||| || |||||||||||||||||||| ||
Sbjct 373638 CTTTAGTGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGAT 373697
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAAC---ACGTACATCCTGGATCC 42592
|||||| | ||||| ||| ||| || ||||||| | || |||||| |||
Sbjct 373698 GGAGAACATCCACTCCGAGACCTACTCC---CTGCTCATCGATACCTACATCAAGGAGAA 373754
Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652
| | |||| | | || ||||| ||||| ||||| || || ||||| ||||||||
Sbjct 373755 CAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGAAGGC 373814
Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAG 42711
|||||||| |||| |||||| || | | || | | | || | | || | ||||| |
Sbjct 373815 CGACTGGGCCATCAAGTGGATCCAG-GACAAGAACTCTTCCTTTGCCCAGCGCCTGGTTG 373873
Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771
||||| ||||||| ||||| ||||||||| || ||||| |||||||||||||||||||
Sbjct 373874 CCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCA 373933
Query 42772 AGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830
|| || |||| || ||||| || || ||||| || ||||| |||||| | ||||||
Sbjct 373934 AGAAGCGAGGTCTC-ATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAG 373992
Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCG 42890
|| ||||| | |||||||||||||| ||| ||| ||||||| | || ||
Sbjct 373993 GGTCTGCACACCGACTTTGCCTGCCTGCTGCACTC---TCACCTCAAGAACCGCGCCAGC 374049
Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950
||||| | |||| | ||||||||| || || || || ||| | |||||| | ||
Sbjct 374050 AAGGAAGTGATCCGTGACATCATCACCGATGCTGTCCGAATTGAGCAAGAGTTCTTGACC 374109
Query 42951 CAGTCGCTGCCCGTG-TCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCA 43009
|| | || ||| || |||| | ||||||||| | |||| ||| ||||||| |
Sbjct 374110 GAGGCTCT-CCCTTGCGCCCTCCTTGGCATGAACTCCAACCTGATGAAGCAGTACATTGA 374168
Query 43010 GTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACAC 43063
|| ||||||||| | ||| || || | | |||| || || ||||||| |
Sbjct 374169 GTTCGTCGCCGATCGTCTGCT-TG-----TCGCTCTCGGCAACGAGAAGATCTACAAGTC 374222
Query 43064 GCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGA 43123
| |||||||||||| ||||||||||| || | | |||||||||||||| |||||
Sbjct 374223 TGCCAACCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGA 374282
Query 43124 GAAGCGCGTCGCCGACTACCAG 43145
||||||||||||||||||||||
Sbjct 374283 GAAGCGCGTCGCCGACTACCAG 374304
>seq4
Length=2906552
Score = 343 bits (380), Expect = 3e-89
Identities = 1112/1711 (65%), Gaps = 53/1711 (3%)
Strand=Plus/Minus
Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796
||| |||| || | || || | ||||||| || | ||||||||||||||||||||||
Sbjct 974836 ACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCTTG 974777
Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856
|| ||| |||| | || ||||||| || | ||| ||| | ||||
Sbjct 974776 AGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCAT-------TGTGGG 974724
Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916
|||| || || ||| ||||||||| ||| || | ||| | | || ||
Sbjct 974723 A--TCCTT---CATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCA 974669
Query 243917 GCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTG 243976
|| ||||| || | | |||||| ||||| | | |||||||| | || ||||
Sbjct 974668 GCTGCCATCTGGACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTG 974609
Query 243977 AGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTG 244036
| | ||||||| ||||||||| | ||||| || | | |||| || |
Sbjct 974608 ATATCTTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTC 974549
Query 244037 CGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTT 244092
|||| |||| ||| ||||| | |||| ||| || ||||| | ||
Sbjct 974548 TTCATGGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGG----TT 974493
Query 244093 CACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTC 244152
|| || || ||||| || | || || || |||||||||| |||| || |||||
Sbjct 974492 GACAACTTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTC 974433
Query 244153 GATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAG 244212
|| || ||| |||||||||| ||||| | ||| || ||||| ||||| || | | ||
Sbjct 974432 GAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAG 974373
Query 244213 CAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACAT 244272
|| ||||| | | |||||| || ||| | ||||| || ||| |||||||
Sbjct 974372 CAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAG 974313
Query 244273 GCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC-TGA 244331
| | ||||| | |||| |||||||||| || || || | |||| | ||
Sbjct 974312 GTC--AGAGGGC-------TTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGC 974262
Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCG 244390
|| | | |||| | | | ||||||||| || || ||| | || | || |
Sbjct 974261 AGGTGAT-CCCTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCC- 974204
Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCG 244450
|| ||||| || | |||||||||||| |||||| |||||||| | || |||| |
Sbjct 974203 TCAAGGGCCGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGA 974144
Query 244451 CAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCG 244510
| ||||| |||| || | ||| ||||||| || ||||| || || | ||
Sbjct 974143 GACTCAAAGGGCATGCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCA 974084
Query 244511 ATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCG 244570
||||||| ||| ||| ||||| | ||| || | || ||||| ||| | ||
Sbjct 974083 ATGGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCA 974024
Query 244571 ATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCG 244630
|| | |||||||||||||||| | || | ||| || ||| || ||||||
Sbjct 974023 ATGATCTTGTTGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCA 973964
Query 244631 TACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCC 244690
|| | | ||| | | || ||| || || | | |||||| | ||||
Sbjct 973963 TA-------GCAGCCTTCG---TTGTAATCGACATAAGCAGG--GAGGGCCAAAGAGGCC 973916
Query 244691 AGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTA 244750
| |||||| || || ||||| || | ||||| || ||||||||||||||||||
Sbjct 973915 AAGTTGCAAACAGCAACCTCATCTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTTG 973856
Query 244751 CTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAG 244810
|| |||||| ||||||| || || ||| |||| ||||||||| |||||||||
Sbjct 973855 GAGCTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAG 973796
Query 244811 AGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTA 244870
||||||||||| || ||||| |||||| | |||| | | ||| || | |
Sbjct 973795 AGCATGAAGGGGTTACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGG 973736
Query 244871 GCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAAC 244930
|| || ||| ||||| | ||||| ||| || |||| ||||||||
Sbjct 973735 GCGCGGATGGTCGTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAAT 973676
Query 244931 TCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCCACT 244988
|| ||| || || | ||||| ||||| || | |||||||| || |||| |
Sbjct 973675 TCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTG--GGGCACATCAGCGTCCAGT 973618
Query 244989 CGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGT 245048
| | | | || | || ||||||||| ||||| |||||||| || |||| | ||
Sbjct 973617 CCAAGTTCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGT 973558
Query 245049 CCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGT 245108
| | || | ||| ||| ||| |||||| | || || | || ||||||||||
Sbjct 973557 CACGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGT 973498
Query 245109 CGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGT 245168
|| ||||||||||||| | ||||| || | ||| || || |||||||| || ||||| |
Sbjct 973497 CGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGAT 973438
Query 245169 CCACCATCCTCTCG-AGCG-CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTG 245226
| | ||| ||| | || | |||||| | || || | || | || |||||||||
Sbjct 973437 CGA-CAT-ATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGT 973380
Query 245227 GCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATGCCTAG 245286
||||||||||| ||||| | ||| || | | || | | || | || ||| |
Sbjct 973379 ACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAAT 973320
Query 245287 TCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCAT 245346
|| || || |||||| || | ||| || |||| | ||||| || ||||| ||
Sbjct 973319 ACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAAT 973260
Query 245347 GCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGA 245406
||| || |||||||| || || ||||| ||||||||||||| || ||| | | |
Sbjct 973259 GCTATCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACCTGC 973200
Query 245407 GTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437
||||||||| |||||| ||| ||||| |||
Sbjct 973199 GTTGAACAGGGTGGGGGAGGCATGGGTGAAG 973169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944338456332880
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