Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq8 96.9 8e-15 >seq8 Length=2103943 Score = 96.9 bits (106), Expect = 8e-15 Identities = 310/473 (66%), Gaps = 6/473 (1%) Strand=Plus/Plus Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCG-GGAG 243344 || ||||| |||| || || |||| | |||||| ||||| || | ||| | || | Sbjct 373852 TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTAT-CT-TCTTCAGCGGTG 373909 Query 243345 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 243403 | ||| ||||||| ||||| ||| |||| | |||||||| || | || | Sbjct 373910 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 373969 Query 243404 ACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAA 243463 ||||| ||||| ||| |||||||| || ||| | || | || || | || Sbjct 373970 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGCACTCTC 374029 Query 243464 AGCTCCAGAACAA-GCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAA 243522 | ||| ||||| || | || ||| | || | |||||||| || || || | Sbjct 374030 ACCTCAAGAACCGCGCCAGCAAG-GAAGTGATCCGTGACATCATCACCGATGCTGTCCGA 374088 Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582 | || | || ||| | ||| ||| | || ||| || ||||||||||||| | Sbjct 374089 ATTGAGCAAGAGTTCTTGACCGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAAC 374148 Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642 || ||| |||||||| || ||||| ||||| || | | |||| || || | ||| Sbjct 374149 CTGATGAAGCAGTACATTGAGTTCGTCGCCGATCGTCTGCTTGTCGCTCTCGGCAACGAG 374208 Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702 || | ||||| || |||||||| | ||| |||||| |||||| || || || Sbjct 374209 AAGATCTACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAAG 374268 Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGAA 243755 || ||||||||||| ||||| ||| || || || ||||||| ||||| Sbjct 374269 ACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAGAAGGCTGGTGTCATGAA 374321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879109769050