Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq8 96.9 8e-15
>seq8
Length=2103943
Score = 96.9 bits (106), Expect = 8e-15
Identities = 310/473 (66%), Gaps = 6/473 (1%)
Strand=Plus/Plus
Query 243286 TCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGCGTTGAAGGTATTCTGTTTTCCG-GGAG 243344
|| ||||| |||| || || |||| | |||||| ||||| || | ||| | || |
Sbjct 373852 TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTAT-CT-TCTTCAGCGGTG 373909
Query 243345 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 243403
| ||| ||||||| ||||| ||| |||| | |||||||| || | || |
Sbjct 373910 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 373969
Query 243404 ACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCGGTGAGCTTATGTATTCAA 243463
||||| ||||| ||| |||||||| || ||| | || | || || | ||
Sbjct 373970 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGCACTCTC 374029
Query 243464 AGCTCCAGAACAA-GCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAGTTGAA 243522
| ||| ||||| || | || ||| | || | |||||||| || || || |
Sbjct 374030 ACCTCAAGAACCGCGCCAGCAAG-GAAGTGATCCGTGACATCATCACCGATGCTGTCCGA 374088
Query 243523 AACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAA 243582
| || | || ||| | ||| ||| | || ||| || ||||||||||||| |
Sbjct 374089 ATTGAGCAAGAGTTCTTGACCGAGGCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAAC 374148
Query 243583 CTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAG 243642
|| ||| |||||||| || ||||| ||||| || | | |||| || || | |||
Sbjct 374149 CTGATGAAGCAGTACATTGAGTTCGTCGCCGATCGTCTGCTTGTCGCTCTCGGCAACGAG 374208
Query 243643 AAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAA 243702
|| | ||||| || |||||||| | ||| |||||| |||||| || || ||
Sbjct 374209 AAGATCTACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATTTCTCTCGGTGGCAAG 374268
Query 243703 ACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCTGGTGTGATGAA 243755
|| ||||||||||| ||||| ||| || || || ||||||| |||||
Sbjct 374269 ACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAGAAGGCTGGTGTCATGAA 374321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879109769050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |