Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq4 232 8e-56 seq8 140 4e-28 >seq4 Length=2906552 Score = 232 bits (256), Expect = 8e-56 Identities = 1168/1839 (64%), Gaps = 43/1839 (2%) Strand=Plus/Minus Query 113558 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 113617 |||| | |||| ||||| || ||| ||||| | || ||||||||||| || ||| Sbjct 974839 TCAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 974780 Query 113618 TTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTGGAGAGTGTTGGACTT 113677 ||||| || |||||||| || | ||||| || | |||| | ||| ||| Sbjct 974779 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCC 974720 Query 113678 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATA 113737 | |||| || ||||| ||||| ||||| ||||| |||||||| || ||||| Sbjct 974719 TTCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATC 974660 Query 113738 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATC 113793 | | || || || ||| | ||||| || || |||| ||| ||| ||||| Sbjct 974659 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATC 974604 Query 113794 ATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCATGAGATCCTTCAT 113853 || ||||| | ||| || || |||||||| | | | || | | |||||| Sbjct 974603 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCAT 974544 Query 113854 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAAC 113910 | | |||||||| || | | || |||| |||| || |||||||| Sbjct 974543 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAAC 974487 Query 113911 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 113970 ||||| || || ||| |||| | | ||||| |||| ||||| ||||| ||||| Sbjct 974486 TTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 974427 Query 113971 CTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 114030 ||| ||||| |||| || |||| || ||| || ||||| || || | ||| | ||| Sbjct 974426 CTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCT 974367 Query 114031 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTTGAGC 114088 ||| || ||| | ||| | || | |||||||| | |||||| || | | | || Sbjct 974366 GTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAGA 974307 Query 114089 TTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCA 114148 | || | | |||||| || || |||||||| || | ||| || || ||||||| Sbjct 974306 G--GGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTG 974249 Query 114149 AATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGA 114208 |||| ||||| || ||||| |||| || | || ||||| ||||| || || Sbjct 974248 AATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGG 974189 Query 114209 TACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAG 114267 || || |||||||| || | |||| || | | ||||| || ||||| | | Sbjct 974188 TAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAG-CCTCGGGAGACTCAAAGGGCAT 974130 Query 114268 TCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 114327 || || || | || || ||||| |||||||| | ||||| || || || | Sbjct 974129 GCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCG 974070 Query 114328 CATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 114387 ||| || || || || || || || || ||| ||| || | | | || || Sbjct 974069 CATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGTTGAG 974010 Query 114388 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 114447 || | || ||||| |||| |||||||||||| | | ||| | | || | Sbjct 974009 GTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTTCGTT 973950 Query 114448 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 114507 | || |||||| ||| ||||| | || |||| || || |||| |||||| Sbjct 973949 GTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTGG 973890 Query 114508 ATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTT 114567 | || |||||| ||||| || || || | || || || ||||| |||| |||||| Sbjct 973889 AGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTT 973830 Query 114568 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 114627 || || ||| ||| || ||||||||||| |||||| | || | || ||||| || Sbjct 973829 CTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGT 973770 Query 114628 TTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCC 114686 |||| | || || | | ||| | | || | ||| | | || | | | || | Sbjct 973769 CTGGGCTTCCAGGATGGAATACCACAGCTTCTG-GGCGCGGATGGTCGTGCGACCACGTC 973711 Query 114687 CCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 114746 |||||| ||| ||||| || | || || || || || || | || | || | Sbjct 973710 CCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCCATAGCAGTCAGCAAGGC 973651 Query 114747 CTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCT--CAACACGCTTCA 114803 | || || || |||| || | || | ||| | ||| || | |||||||||||| Sbjct 973650 CAGG-GCATTCGTTGGGGCACATCAGCGTCCAGT--CCAAGTTCTTTTCAACACGCTTCA 973594 Query 114804 TGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCC 114863 ||||||| || || ||||||||||| ||| | || || ||| | ||||| | | Sbjct 973593 TGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTGC 973534 Query 114864 CCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACA 114923 | || || || | || | || || | || || |||||||| || || ||||| | Sbjct 973533 CGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGA 973474 Query 114924 CCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCAT 114977 || | | || | |||| |||| |||| | ||||| || || ||| | Sbjct 973473 TGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGT 973417 Query 114978 TAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG 115037 | || || |||||||| ||||| ||||| | ||| || || || || ||| || Sbjct 973416 TGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAG 973357 Query 115038 ACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTT 115097 | |||| | || |||| || || |||||||| || ||| ||| || || Sbjct 973356 AGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCA 973297 Query 115098 GCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAA 115157 || || | | ||| || ||||||| || || || || |||| | ||| | Sbjct 973296 TGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCA 973237 Query 115158 GGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCG 115216 |||||| |||| || ||||| || ||||| |||||||| ||||| || | || Sbjct 973236 AGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCA 973178 Query 115217 TGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTT 115274 ||| ||| | | |||| |||||| | ||| ||||||| ||| |||||| | Sbjct 973177 TGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCAT 973120 Query 115275 CCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATAC 115334 | || || || | || || ||||||| ||||| || || || | | | | Sbjct 973119 CTCCCCAGATGCCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGC 973060 Query 115335 CATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 115373 |||| ||| || | ||||| | ||||| ||||||| Sbjct 973059 CATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGA 973021 >seq8 Length=2103943 Score = 140 bits (154), Expect = 4e-28 Identities = 351/525 (67%), Gaps = 15/525 (3%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||||||||| |||||||| || || || ||| ||| || Sbjct 374013 GGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 373954 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | ||| | ||| ||||||||| Sbjct 373953 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 373894 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || |||| || |||| |||||||| || || |||| Sbjct 373893 ACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 373837 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | |||||| || ||||| | ||||| || || || || | ||||| || || | Sbjct 373836 GATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 373777 Query 126283 AAAGA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATAT 126340 |||| || || | | ||| | || |||||||| |||| ||||| || || Sbjct 373776 GAAGAGGTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTATCGATGAGCAGGGAGTAG 373719 Query 126341 GTTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCT 126399 || ||| ||||| | | ||| || | ||| | ||||||| | || || ||| Sbjct 373718 GTCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGG 373660 Query 126400 TATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCC 126459 ||||| ||||| | ||| | | ||||| ||||| ||||| || | Sbjct 373659 GATCTGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGC 373600 Query 126460 AGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTT 126516 ||||| || |||||||| | ||||| | || || | ||||||| || | || Sbjct 373599 GGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTT 373540 Query 126517 CCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| |||||||| || ||||| | ||| || || ||||| Sbjct 373539 CCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 373495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353129584040