Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq4 251 7e-62
>seq4
Length=2906552
Score = 251 bits (278), Expect = 7e-62
Identities = 1075/1675 (64%), Gaps = 44/1675 (3%)
Strand=Plus/Plus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||| | |||||| ||| |||| ||| ||||| || ||| | ||||||
Sbjct 973002 AACTACCAATACTTCGGCTTCAAGACTTTGGAACGGTCATACCTTCTGAAGCTTGATGGC 973061
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || ||||| || || || || | ||||| || | | || || || |
Sbjct 973062 AAGATTGTTGAGCGGCCACAGCACATGATTATGCGAGTGTCTGTTGGCATCTGGGGAGAT 973121
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| | ||| || | | | || |||| |||| | ||| |||
Sbjct 973122 GACATTGAGCGTGTCCTGGAGACATACAACCTCATGTCCAGCAAGTTCTTCACCCATGCC 973181
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
|||| |||||||||||||| || |||||| | | ||| |||| || || ||| || |
Sbjct 973182 TCCCCCACCCTGTTCAACGCAGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTC 973241
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| ||| || || | ||||| || ||| ||||| | ||
Sbjct 973242 GAC-ATGAAGGACGATAGCATTGAGGGTATCTACGACACTCTGAAGACATGTGCCATGAT 973300
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073
|| || || || || || || | | |||||| | | ||||||| || || ||
Sbjct 973301 TTCCAAGATGGCTGGTGGTATTGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTA 973360
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
||| || ||||| || ||||| ||||| | | || ||||| || || ||||||||
Sbjct 973361 CATTGCTGGCACCAACGGTACCTCTAACGGTATTATTCCCATGCTTCGAGTGTTCAACAA 973420
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || | || || || ||||||||| | | | ||| | || || |||| ||
Sbjct 973421 CACTGCCAGATATGTCGATCAGGGTGGTAACAAGCGTCCTGGTGCCTTTGCCATCTACCT 973480
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||||||||||||| ||||| | ||| | || || || |||||||||||||| ||
Sbjct 973481 CGAGCCCTGGCACGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGA 973540
Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313
|| | ||| | ||| | ||| ||||||||| | || || || || ||||| ||
Sbjct 973541 AGAGGTCCGCGCCCGTGACTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCG 973600
Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373
|| || || |||| | ||||| || | || ||||| ||||| || || || | ||
Sbjct 973601 TGTTGAAAAGAACTTGGACTGGACGCTGATGTGCCCCAACGAATGCCCTGGCCTTGCTGA 973660
Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCA 94432
| | ||| | || || | ||||||| || || | |||| | || |
Sbjct 973661 CTGCTATGGCGAGGAATTCGAGGCTTTGTATGAGAAGTATGAGAAGGAGGGACGTGGTC- 973719
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| | | || || |||||||||| || ||| |||| | ||| ||||| |
Sbjct 973720 GCACGACCATCCGCGCCCAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACTGAGACTG 973779
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
||| |||| ||| | | |||||| | |||| |||| ||||||| || |||| |
Sbjct 973780 GTAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGG 973839
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| ||| ||||| || || |||||||||||| ||||||| | |||| || |||
Sbjct 973840 GAACCATCCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTGTGCTCCAGATGAGG 973899
Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672
||||||| || ||| ||| ||| | ||| | ||| || ||| ||||
Sbjct 973900 TTGCTGTTTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTATGT-CGA-----TTACA--A 973951
Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTT-GTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731
| | ||| | | || | || ||||| |||| | | | || | ||| |||
Sbjct 973952 CGAAGGCTGC-TATGACTTTAAGAAGCTTCATGAAGTCACCAAGGTGG-TTGTCCGCAAC 974009
Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791
|| |||| | | || || || |||||| |||| |||||| ||| ||| ||
Sbjct 974010 CTCAACAAGATCATTGATGTCAATCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATG 974069
Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851
|| || ||||| || | || ||||||||| | || ||||| | | ||||
Sbjct 974070 CGCCACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCCCTGCGC 974129
Query 94852 CTGCCCTACGACTCTGTCGA--CGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909
|||||| || ||| ||| | || | | |||| | | || || || | ||| |
Sbjct 974130 ATGCCCTTTGAGTCTCCCGAGGCTCGTCAG--CTGAACAAGCAGATCTTTGAGACCATCT 974187
Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAAT 94969
| | | |||| | | || | | | |||| || | || || ||||||
Sbjct 974188 ACCATGCGGCCCTTGAGGCTTCTATGGAGATCGCCA---AGGTGGAGGGTCCCTACGAAT 974244
Query 94970 CGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027
| ||| ||||| || || | | ||||||| | || |||||| | |||| ||| ||
Sbjct 974245 CATTCAAGGGATCACC--TGCATCCGAGGGCATCCTCCAATTCGACATGTGGGATGTCAA 974302
Query 95028 GCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085
|||||| | |||| || ||||| |||| | | || || | | | |||||| |
Sbjct 974303 GCCCTCTGACCTGTGGGAGTGGGACTCGCTCAAGGAGCAGA--TCAAGGAGCACGGTACG 974360
Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145
||| |||| | ||||| ||||| || ||| ||| | ||||| || ||||||
Sbjct 974361 CGCAACAGCTTGCTCCTCGCCCCTATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAAC 974420
Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205
||||||| ||||| |||| ||| |||||| | ||| | | || || || ||||| ||
Sbjct 974421 AACGAGTGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAG 974480
Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGG-GTGT-GTGGGGT 95262
|||| || ||||| || || |||||| | || | | || | | || | |
Sbjct 974481 TTCCAAGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTCTGGTCCGAT 974540
Query 95263 GACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA 95318
| || | ||||||| | |||| | ||||||||| | ||||||||||| |
Sbjct 974541 GCCA---TGAAGAACCGTATCATTGCT----GAGAACGGCTCCATTCAGAACATCCCCAA 974593
Query 95319 AATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373
|| || || || |||||||| || ||||||||||| |||||||| | ||||||
Sbjct 974594 CATCCCCGAAGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGC 974648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722810405480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |