Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq4 251 7e-62 >seq4 Length=2906552 Score = 251 bits (278), Expect = 7e-62 Identities = 1075/1675 (64%), Gaps = 44/1675 (3%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||| | |||||| ||| |||| ||| ||||| || ||| | |||||| Sbjct 973002 AACTACCAATACTTCGGCTTCAAGACTTTGGAACGGTCATACCTTCTGAAGCTTGATGGC 973061 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || ||||| || || || || | ||||| || | | || || || | Sbjct 973062 AAGATTGTTGAGCGGCCACAGCACATGATTATGCGAGTGTCTGTTGGCATCTGGGGAGAT 973121 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | ||| || | | | || |||| |||| | ||| ||| Sbjct 973122 GACATTGAGCGTGTCCTGGAGACATACAACCTCATGTCCAGCAAGTTCTTCACCCATGCC 973181 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 |||| |||||||||||||| || |||||| | | ||| |||| || || ||| || | Sbjct 973182 TCCCCCACCCTGTTCAACGCAGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTC 973241 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| ||| || || | ||||| || ||| ||||| | || Sbjct 973242 GAC-ATGAAGGACGATAGCATTGAGGGTATCTACGACACTCTGAAGACATGTGCCATGAT 973300 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTA 94073 || || || || || || || | | |||||| | | ||||||| || || || Sbjct 973301 TTCCAAGATGGCTGGTGGTATTGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTA 973360 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 ||| || ||||| || ||||| ||||| | | || ||||| || || |||||||| Sbjct 973361 CATTGCTGGCACCAACGGTACCTCTAACGGTATTATTCCCATGCTTCGAGTGTTCAACAA 973420 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || | || || || ||||||||| | | | ||| | || || |||| || Sbjct 973421 CACTGCCAGATATGTCGATCAGGGTGGTAACAAGCGTCCTGGTGCCTTTGCCATCTACCT 973480 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||||||||||||| ||||| | ||| | || || || |||||||||||||| || Sbjct 973481 CGAGCCCTGGCACGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGA 973540 Query 94254 TCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACG 94313 || | ||| | ||| | ||| ||||||||| | || || || || ||||| || Sbjct 973541 AGAGGTCCGCGCCCGTGACTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCG 973600 Query 94314 CGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGA 94373 || || || |||| | ||||| || | || ||||| ||||| || || || | || Sbjct 973601 TGTTGAAAAGAACTTGGACTGGACGCTGATGTGCCCCAACGAATGCCCTGGCCTTGCTGA 973660 Query 94374 CGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCA 94432 | | ||| | || || | ||||||| || || | |||| | || | Sbjct 973661 CTGCTATGGCGAGGAATTCGAGGCTTTGTATGAGAAGTATGAGAAGGAGGGACGTGGTC- 973719 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | | | || || |||||||||| || ||| |||| | ||| ||||| | Sbjct 973720 GCACGACCATCCGCGCCCAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACTGAGACTG 973779 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 ||| |||| ||| | | |||||| | |||| |||| ||||||| || |||| | Sbjct 973780 GTAACCCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGG 973839 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| ||||| || || |||||||||||| ||||||| | |||| || ||| Sbjct 973840 GAACCATCCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTGTGCTCCAGATGAGG 973899 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672 ||||||| || ||| ||| ||| | ||| | ||| || ||| |||| Sbjct 973900 TTGCTGTTTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTATGT-CGA-----TTACA--A 973951 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTT-GTGAACTTCGCGGGAAGGATGGTCTTGAAC 94731 | | ||| | | || | || ||||| |||| | | | || | ||| ||| Sbjct 973952 CGAAGGCTGC-TATGACTTTAAGAAGCTTCATGAAGTCACCAAGGTGG-TTGTCCGCAAC 974009 Query 94732 CTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACCTG 94791 || |||| | | || || || |||||| |||| |||||| ||| ||| || Sbjct 974010 CTCAACAAGATCATTGATGTCAATCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATG 974069 Query 94792 AAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGCGT 94851 || || ||||| || | || ||||||||| | || ||||| | | |||| Sbjct 974070 CGCCACCGACCCATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCCCTGCGC 974129 Query 94852 CTGCCCTACGACTCTGTCGA--CGCGGCGGGTTTGAATTTGAACATATTCGAAAGCATTT 94909 |||||| || ||| ||| | || | | |||| | | || || || | ||| | Sbjct 974130 ATGCCCTTTGAGTCTCCCGAGGCTCGTCAG--CTGAACAAGCAGATCTTTGAGACCATCT 974187 Query 94910 ATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAAT 94969 | | | |||| | | || | | | |||| || | || || |||||| Sbjct 974188 ACCATGCGGCCCTTGAGGCTTCTATGGAGATCGCCA---AGGTGGAGGGTCCCTACGAAT 974244 Query 94970 CGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAA 95027 | ||| ||||| || || | | ||||||| | || |||||| | |||| ||| || Sbjct 974245 CATTCAAGGGATCACC--TGCATCCGAGGGCATCCTCCAATTCGACATGTGGGATGTCAA 974302 Query 95028 GCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGTGTG 95085 |||||| | |||| || ||||| |||| | | || || | | | |||||| | Sbjct 974303 GCCCTCTGACCTGTGGGAGTGGGACTCGCTCAAGGAGCAGA--TCAAGGAGCACGGTACG 974360 Query 95086 AAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAAC 95145 ||| |||| | ||||| ||||| || ||| ||| | ||||| || |||||| Sbjct 974361 CGCAACAGCTTGCTCCTCGCCCCTATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAAC 974420 Query 95146 AACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAA 95205 ||||||| ||||| |||| ||| |||||| | ||| | | || || || ||||| || Sbjct 974421 AACGAGTGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAG 974480 Query 95206 TTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGG-GTGT-GTGGGGT 95262 |||| || ||||| || || |||||| | || | | || | | || | | Sbjct 974481 TTCCAAGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTCTGGTCCGAT 974540 Query 95263 GACAAGGTCAAGAACC----AACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCA 95318 | || | ||||||| | |||| | ||||||||| | ||||||||||| | Sbjct 974541 GCCA---TGAAGAACCGTATCATTGCT----GAGAACGGCTCCATTCAGAACATCCCCAA 974593 Query 95319 AATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 || || || || |||||||| || ||||||||||| |||||||| | |||||| Sbjct 974594 CATCCCCGAAGATATCAAGGCCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGC 974648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722810405480