Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq8 152 5e-32
seq4 147 2e-30
seq7 100 3e-16
seq3 84.2 2e-11
>seq8
Length=2103943
Score = 152 bits (168), Expect = 5e-32
Identities = 500/765 (65%), Gaps = 29/765 (4%)
Strand=Plus/Plus
Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145
|||||||||||| || || ||| ||| | |||| ||||| |||||| | ||| ||
Sbjct 373552 AACGATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGC 373611
Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204
|| || ||| ||||| ||||| | | || || | ||| || | | ||||| |
Sbjct 373612 ATTGTCAACGAGAACCTGGTCGAGCGCTTT-AGTGGCGAGGTCCAGATCCCCGAGGCTCG 373670
Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264
|| ||| || || || | | || ||| | | ||| | |||| ||| |||||
Sbjct 373671 ATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCT 373730
Query 52265 CATTGAGCAGCTG-ATAAAAGATGAGCA-CGAGCGCGACACGCTGCTGAATGCGTTCGAG 52322
||| || | || || || || || || | ||||| | || | || || | |||
Sbjct 373731 CATCGAT-ACCTACATCAAGGA-GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAG 373788
Query 52323 CACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACC 52382
| | || ||| ||||||| ||||| | ||||| || ||||||||| || | | | |
Sbjct 373789 ACCATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAAC 373848
Query 52383 GCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGC 52442
| | | ||| ||||| |||| ||||| ||| || ||||| | || || |||
Sbjct 373849 TCTTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGT 373908
Query 52443 AGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGC 52502
||||||| ||||||| | | || | | ||| | ||||| || ||||| || |
Sbjct 373909 GCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCC 373968
Query 52503 AACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT--------CT 52554
|||||| | || || || ||||| || |||||||| |||||||| ||||| ||
Sbjct 373969 AACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCTGCTGCACTCT 374028
Query 52555 -ACTACAAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAG 52613
|| ||||| |||| | | | || || || || ||| ||| |||
Sbjct 374029 CACCTCAAGAACCGCGCCAGCAAGGAAGTG-ATCCG----------TGA-CATCATCACC 374076
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
|| || || || || | ||||| || || | || || || || || || |||
Sbjct 374077 GATGCTGTCCGAATTGAGCAAGAGTTCTTGACCGAGGCTCTCCCTTGCGCCCTCCTTGGC 374136
Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733
|||||| | | ||| ||||||| ||||| || || ||||||||| | ||
Sbjct 374137 ATGAACTCCAACCTGATGAAGCAGTACATTGAGTTCGTCGCCGATCGTCTGCTTGTCGCT 374196
Query 52734 CTCGGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTC 52792
||||| || | | ||| || ||| || ||| || || || || ||| | ||||||||
Sbjct 374197 CTCGG-CAACGAGAAGATCTACAAGTCTGCCAACCCCTTCGACTTCATGGAGAACATTTC 374255
Query 52793 GCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| | |||||||||||||| ||||||||||| |||| ||| ||
Sbjct 374256 TCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTA 374300
>seq4
Length=2906552
Score = 147 bits (162), Expect = 2e-30
Identities = 594/920 (65%), Gaps = 27/920 (3%)
Strand=Plus/Minus
Query 153390 GGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGGTCGA 153449
||||||||||| | || |||||||| |||||||||| ||| || || ||||||||
Sbjct 974134 GGCATGCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGG 974075
Query 153450 TGCTTCTCGTTGCTGCGCCTCGCGCTCGCT--ATGGGATAGTGATTGCGATCGATAATTT 153507
|| | ||||||| | || ||| || | || ||||||||| ||| || || |
Sbjct 974074 TGGCGCATGTTGCTGTTGCGGGC-CTC-CTGGACAGGGTAGTGATTGACATCAATGATCT 974017
Query 153508 TGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGGTCA 153567
||||||||||||| || ||||| || || | | | ||| |||| || ||||||
Sbjct 974016 TGTTGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGC 973957
Query 153568 TTTCGTCG---ACG-CGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCC 153623
||||| | || | || ||| | | ||| | ||| |||| || || || ||
Sbjct 973956 CTTCGTTGTAATCGACATAAGCAGGG----AGGGCCAAAGAGGCCAAGTTGCAAACAGCA 973901
Query 153624 GTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACG 153683
||| || | | | ||||| | ||||||| |||||||||| || |||
Sbjct 973900 ACCTCATCTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTT 973841
Query 153684 CCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 153743
|||| || | ||| ||||| ||||| ||||| || || ||| |||||||| | ||
Sbjct 973840 CCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTA 973781
Query 153744 CCGGTCTCGACTTGCGTTTCGACGAT--AAACCTATGCAGGTCCTGCGCTCGCACCCGCT 153801
|| ||||| || | ||| | ||| || | | ||| | ||| || || | |
Sbjct 973780 CCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCA--CAGCTTCTGGGCGCGGATGGTCG 973723
Query 153802 GCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGCCGTAGC 153861
||| || ||||| |||| || ||| |||| ||| || || ||||| ||||
Sbjct 973722 TGCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCCATAGC 973663
Query 153862 AGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCACATATCGTCGGCGTTGA 153921
|||| || ||||| || || | | || |||||||||| ||| || | |
Sbjct 973662 AGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTCCAAGTTCTTTTCAA 973603
Query 153922 CGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAAT 153981
| || |||||| ||||| || | |||||| || | | ||| || || | |
Sbjct 973602 CACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCT 973543
Query 153982 CCTCCGCGCCCATGTTGCGTTTC--AGATTGAGCACGCTATAGATGTCGGCGTGCCAGGG 154039
| ||| ||| ||| || | |||| || | | ||| |||||||||||||||
Sbjct 973542 CTTCCTTGCCGTGGTT--CTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGG 973485
Query 154040 TTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCCCTGATCGACGTGGCGCAC 154096
|| | ||||| ||| | |||||| |||| || || ||||||||||| | | |
Sbjct 973484 CTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGC 973425
Query 154097 CATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCGTTGGTCGAATT 154156
| |||||||| || || | |||||| | ||| | | ||| |||||||| |
Sbjct 973424 AGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGC 973365
Query 154157 GATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCAATGCCGCC-GCCGTACT 154215
|| | |||| ||| || | | || ||||| | |||||| || || ||| | ||
Sbjct 973364 AATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCAT-CT 973306
Query 154216 TTGATATGGCAGCGCA-GTCGCCCAGCGTCCTGTAGATGCCGTCGATGCTATCGTCGCGG 154274
| || || || || ||| ||| || |||||| || || |||||||||||
Sbjct 973305 TGGAAATCATGGCACATGTC-TTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTC 973247
Query 154275 ACGCCGAGCAAGAAACACGA 154294
| | ||| |||||| || ||
Sbjct 973246 ATGTCGACCAAGAAGCATGA 973227
>seq7
Length=2414983
Score = 100 bits (110), Expect = 3e-16
Identities = 142/197 (72%), Gaps = 2/197 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| || ||| || ||||||||||| || || |
Sbjct 116127 GACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGGCCATCCTCGAGTTGCTTGCCAGCG 116068
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
| || |||||||| ||||| ||||| || || || ||||| ||| || || | |
Sbjct 116067 AAAATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTCACA 116008
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
|||| | | ||| |||| ||||||||||||| || | || || || || || || ||
Sbjct 116007 TTGT-CGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 115949
Query 138600 TACAAAAATCTGCATGG 138616
|| || || |||||||
Sbjct 115948 GACGAAGATTTGCATGG 115932
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || |||| |||| || | || | | | |||||||| || ||||||||||||
Sbjct 819906 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 819847
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || ||||| || || ||||| | |||| | ||||| |||||||| ||
Sbjct 819846 AGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGA 819787
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| || || ||||| ||| || || | ||||| | | |||||||| ||||||||
Sbjct 819786 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT-CGATGGTGTCGGAAGACTCCAC 819728
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | ||| || || || || || || || |||||||||||
Sbjct 819727 CTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 819680
>seq3
Length=3158035
Score = 84.2 bits (92), Expect = 2e-11
Identities = 137/194 (71%), Gaps = 4/194 (2%)
Strand=Plus/Plus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|| ||| || |||||||||||||||| || | ||| || || || ||||| | |
Sbjct 1903396 CTTCTTCTGGATGTTGTAGTCGCTCAAGGTGTGACCGTCTTCCAGCTGCTTACCAGCGAA 1903455
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
||||| ||||| ||||| || || || || |||||||| ||| | || | || | |
Sbjct 1903456 GATTAAGCGCTGCTGGTCAGGGGGAATGCCCTCTTTGTC-CTGAATCTTGGACTTGACGT 1903514
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | |||||||| || ||||||| | || | || || || || ||||| ||
Sbjct 1903515 TG-TCGATGGTGTCGGAAGATTCCACCTTAAGGGTAATTGTCTTGCCGGTGAGAGTCTTG 1903573
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||| ||
Sbjct 1903574 ACGAAAATCTGTAT 1903587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496262009193360
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