Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq8 149 6e-31
seq7 127 2e-24
seq2 95.1 1e-14
>seq8
Length=2103943
Score = 149 bits (164), Expect = 6e-31
Identities = 405/608 (67%), Gaps = 19/608 (3%)
Strand=Plus/Plus
Query 46979 CATCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACGAAGAGA-AGC 47037
||||||| | || | ||| ||| ||||| | || |||||| || ||| || |||
Sbjct 373704 CATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGA-GAACAGCCAGC 373762
Query 47038 A-AGCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGG 47096
||| || || || |||| | |||| ||| || ||| | |||| |||||||| |||
Sbjct 373763 GCAGCTAC-CTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGAAGGCCGACTGG 373821
Query 47097 GCCATGAAGTACATTGAAAACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCC 47156
||||| |||| || | || | ||| | | ||| | || || | || || |||
Sbjct 373822 GCCATCAAGTGGATCCAGGACAAGAACTCTTCCTTTGCCCAGCGCCTGGTTGCCTTTGCC 373881
Query 47157 ATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAA 47216
||| ||||| |||||||| || |||||| | || || | | || | |
Sbjct 373882 GCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGA 373941
Query 47217 GGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCAC 47276
|| | ||||| || || || ||| ||||||||| ||||| | ||||| || ||||||
Sbjct 373942 GGTCTCATGCCTGGTCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCAC 374001
Query 47277 ACCAACTTTGCCTGTCT-CT--ACTA-CAACACTAGAGTCGATCAA--AAGTTGGACGTG 47330
||| |||||||||| || || ||| || | | ||| || | | ||| || |||
Sbjct 374002 ACCGACTTTGCCTGCCTGCTGCACTCTCACCTCAAGAACCGCGCCAGCAAG---GAAGTG 374058
Query 47331 CCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAG 47390
| ||| ||||| | |||| || ||| |||||| ||||| || |||||
Sbjct 374059 ATC--CGT----GACATCATCACCGATGCTGTCCGAATTGAGCAAGAGTTCTTGACCGAG 374112
Query 47391 GCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTT 47450
||||| || | | | || |||||| | | |||||| ||||||| || ||
Sbjct 374113 GCTCTCCCTTGCGCCCTCCTTGGCATGAACTCCAACCTGATGAAGCAGTACATTGAGTTC 374172
Query 47451 GTCGCCGACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCA 47510
|||||||| || ||||| || || | ||||| ||| | | | || ||
Sbjct 374173 GTCGCCGATCGTCTGCTTGTCGCTCTCGGCAACGAGAAGATCTACAAGTCTGCCAACCCC 374232
Query 47511 TTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTC 47570
||||| || ||| | |||||||| |||| |||||||||||||| |||||||||||||||
Sbjct 374233 TTCGACTTCATGGAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTC 374292
Query 47571 GGCGAATA 47578
| ||| ||
Sbjct 374293 GCCGACTA 374300
>seq7
Length=2414983
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943
|| ||||| || | |||| |||| || | |||||||| || || || ||||| |||
Sbjct 819909 GCACCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 819850
Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003
| || || ||| || ||||| || |||||| |||||||||||||||| || ||
Sbjct 819849 GAGAGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGG 819790
Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCG 127063
|| ||||||||||||||| ||| || ||||| | |||| |||||| | | |||
Sbjct 819789 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCC 819730
Query 127064 ACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || | ||| | ||| || || || || || || || |||||||||||
Sbjct 819729 ACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 819680
Score = 102 bits (112), Expect = 8e-17
Identities = 142/199 (71%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| ||| || || || ||| || || || || |||
Sbjct 116130 GTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGGCCATCCTCGAGTTGCTTGCCA 116071
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| | |||| |||||||| || ||||| ||||||||||||||| ||| || |||
Sbjct 116070 GCGAAAATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTC 116011
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||| || | | ||| || |||| ||| | || |||||||| || ||
Sbjct 116010 ACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 115951
Query 127097 TTTACAAAAATCTGCATGG 127115
|| || || || |||||||
Sbjct 115950 TTGACGAAGATTTGCATGG 115932
Score = 93.3 bits (102), Expect = 4e-14
Identities = 123/167 (74%), Gaps = 3/167 (2%)
Strand=Plus/Minus
Query 126877 CTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATT 126936
|| ||||| ||||| || | |||| ||||| || | || ||| || || || ||
Sbjct 116554 CTTTACTGG-CCACCACGAAGACGCAGAACCAAGTGCAGTGTGCTCTCCTTCTGGATGTT 116496
Query 126937 GTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTG 126996
||| |||| || |||||| || || ||||| || ||||| ||||||| ||||||||
Sbjct 116495 GTAGTCGCTCAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTG 116436
Query 126997 ATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGT 127042
|| ||||| || |||||||||||| |||| || ||||| |||||
Sbjct 116435 GTCAGGAGGAATACCCTCCTTGTCC-TGATCTTGGACTTGACGTTGT 116390
>seq2
Length=3541710
Score = 95.1 bits (104), Expect = 1e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| ||| | ||||| ||| || ||||| || ||||| |||||
Sbjct 89112 TTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATC 89053
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045
||||||||||| || || || ||||||||||||||| ||| || ||||| | |||
Sbjct 89052 AATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 88993
Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 127105
| ||||| | |||||| || | ||| | || ||||| ||||| || || || |||
Sbjct 88992 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 88933
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500425543120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |