Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4 226 3e-54
seq8 152 6e-32
>seq4
Length=2906552
Score = 226 bits (250), Expect = 3e-54
Identities = 1173/1844 (64%), Gaps = 53/1844 (3%)
Strand=Plus/Minus
Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578
|||| | |||| ||||| || ||| ||||| | || ||||||||||| || |||
Sbjct 974839 TCAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 974780
Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638
||||| || |||||||| || | ||||| || | |||| | ||| |||
Sbjct 974779 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCC 974720
Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698
| |||| || ||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 974719 TTCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATC 974660
Query 115699 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATC 115754
| | || || || ||| | ||||| || || |||| ||| ||| |||||
Sbjct 974659 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATC 974604
Query 115755 ATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTT 115811
|| ||||| | ||| || || || ||||| || | |||| | | |||
Sbjct 974603 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTT---CTCAGCAATGATACGGTTCTT 974547
Query 115812 CATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGA 115867
||| | | |||||||| || | | || |||| | | ||| | ||||
Sbjct 974546 CATGGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGG----TTGA 974491
Query 115868 CAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAA 115927
|||| ||||| || || ||| |||| | | |||||||||| ||||| ||||| |
Sbjct 974490 CAACTTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGA 974431
Query 115928 AGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAA 115987
||||||| ||||| |||| || |||| || ||| || ||||| || || | ||| |
Sbjct 974430 AGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCA 974371
Query 115988 GGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTT 116045
||||||||| ||| | || | || | |||||||| | |||||| || | | |
Sbjct 974370 AGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGT 974311
Query 116046 GAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCC 116105
|| | || | |||||||| || || |||||||| || | ||| || || |||||
Sbjct 974310 CAGAG--GGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCC 974253
Query 116106 CTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGC 116165
|| |||| || || || ||||| |||| || | || ||||| ||||| ||
Sbjct 974252 CTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGC 974193
Query 116166 GTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACG 116224
|| || || |||||||| || | |||| || | | ||||| || ||||| |
Sbjct 974192 ATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAG-CCTCGGGAGACTCAAAGG 974134
Query 116225 CGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGAT 116284
| || || || | || || ||||| |||||||| | ||||| || || |
Sbjct 974133 GCATGCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGT 974074
Query 116285 GTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTAT 116344
| | ||| || || || || || || || || ||| ||| || | | | |
Sbjct 974073 GGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGT 974014
Query 116345 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAG 116404
| || || | || ||||| |||| |||||||||||| | | ||| | | ||
Sbjct 974013 TGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTT 973954
Query 116405 TCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCAT 116464
| | || |||||| ||| ||||| | || |||| || || |||| |||||
Sbjct 973953 CGTTGTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCAT 973894
Query 116465 CCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGT 116524
| | || |||||| ||||| || || || | || || || ||||| |||| ||
Sbjct 973893 CTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGT 973834
Query 116525 TCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCT 116584
|||| || || ||| ||| || ||||||||||||||||| | || | || ||||
Sbjct 973833 TCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCT 973774
Query 116585 CCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCT 116643
| || |||| | || || | | ||| | | || | ||| | | || | | |
Sbjct 973773 CAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTG-GGCGCGGATGGTCGTGCGACCA 973715
Query 116644 CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGA 116702
|| ||||||| ||| ||||| || | ||||| || || || || | ||| || |
Sbjct 973714 CGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCC-ATAGCAGTCAGC 973656
Query 116703 GAGCCCTGGTGCCTTATCTGGA-CAGAAGAGAGACCATTGACCACCCTCCT--CAACCCG 116759
|| || || || || ||| || | || | ||| | ||| || | |||| ||
Sbjct 973655 AAGGCCAGG-GCATTCGTTGGGGCACATCAGCGTCCAGT--CCAAGTTCTTTTCAACACG 973599
Query 116760 CTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTC 116819
|||||||||||| || || |||||||| || ||| | || || ||| | |||||
Sbjct 973598 CTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTC 973539
Query 116820 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 116879
| || || || || | || | || || | || || |||||||| || || ||
Sbjct 973538 CTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAG 973479
Query 116880 GTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGT 116933
||| | || | | || | |||| |||| |||| | ||||| || || ||
Sbjct 973478 GTAGATGGCAAAGGCACCAGGACGCTTG---TTACCACCCTGATCGACATATCTGGCAGT 973422
Query 116934 TGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT 116993
||| || || |||||||| ||||| ||||| | ||| || || || || |||
Sbjct 973421 GTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAAT 973362
Query 116994 ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGA 117053
||| | |||| | || ||||| || || |||||||| || ||| ||| ||
Sbjct 973361 GTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGA 973302
Query 117054 GATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGC 117113
|| || || | | ||| || ||||||| || || || || |||| | |
Sbjct 973301 AATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTC 973242
Query 117114 GATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTG 117172
|| | |||||| |||| || ||||| || ||||| |||||||| ||||| || |
Sbjct 973241 GACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGG 973183
Query 117173 TCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAAT 117230
|| ||| ||| | | |||| |||||| | ||| ||||||| |||| |||
Sbjct 973182 AGGCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAAT 973125
Query 117231 GTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAG 117290
||| || || || || | || || ||||||| ||||| || || || | |
Sbjct 973124 GTCATCTCCCCAGATGCCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAAT 973065
Query 117291 GATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 117334
| ||||| ||| || | ||||| | ||||| |||||||
Sbjct 973064 CTTGCCATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGA 973021
>seq8
Length=2103943
Score = 152 bits (168), Expect = 6e-32
Identities = 532/820 (65%), Gaps = 29/820 (4%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
|||||| |||| ||||||||||||||||| ||||| ||| |||| || ||||||||
Sbjct 374301 GTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTCCAT 374242
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAATCTGTTTGAGGAGAC 127349
|| || || ||||| || || | || | | | || | | || ||||
Sbjct 374241 GAAGTCGAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACA-AGCAGAC 374183
Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409
|||| | |||| |||||||||||| |||| | |||||||| || | |||| |
Sbjct 374182 GATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGGAGGGCGC 374123
Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469
| ||||| || || | |||| | | |||||| ||||| || | |||| |
Sbjct 374122 AAGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATGTCAC 374063
Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGA----AGAGTTCCACAG----- 127520
| || ||| | || ||| |||||| ||||| | |||
Sbjct 374062 GGAT------CACTTCCTTGCTGGCGCGGT---TCTTGAGGTGAGAGTGCAGCAGGCAGG 374012
Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580
|||| || ||| |||||||||||||| |||||||| || || || ||| |||||| |
Sbjct 374011 CAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAG 373952
Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640
|||||||||| |||||||| | |||||| || | ||| | || ||||||||| |
Sbjct 373951 GCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATAC 373892
Query 127641 CCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACC 127700
|||| || || || |||| || |||| ||||||||| | ||| | | ||
Sbjct 373891 CCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATCC 373832
Query 127701 ACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGA 127760
|||| || ||||| | ||||| || || || || | ||||| || || | ||||
Sbjct 373831 ACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGA 373772
Query 127761 -GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 127818
|| || | | ||| | || |||||||| |||| ||||| || || || ||
Sbjct 373771 GGTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTC 373714
Query 127819 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 127877
| ||||| | | ||| || | ||| | ||||||| | || || ||| ||||
Sbjct 373713 GGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCT 373655
Query 127878 GTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 127937
| ||||| | ||| | | ||||| ||||| ||||| || | ||||
Sbjct 373654 GGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAA 373595
Query 127938 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 127994
| || |||||||| | ||||| | || || | ||||||| || | |||||||
Sbjct 373594 AGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGT 373535
Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||| |||||||| || ||||| | ||| || || |||||
Sbjct 373534 CGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 373495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506716863080
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