Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 226 3e-54 seq8 152 6e-32 >seq4 Length=2906552 Score = 226 bits (250), Expect = 3e-54 Identities = 1173/1844 (64%), Gaps = 53/1844 (3%) Strand=Plus/Minus Query 115519 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 115578 |||| | |||| ||||| || ||| ||||| | || ||||||||||| || ||| Sbjct 974839 TCAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 974780 Query 115579 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGTGTTGGACTT 115638 ||||| || |||||||| || | ||||| || | |||| | ||| ||| Sbjct 974779 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCC 974720 Query 115639 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 115698 | |||| || ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 974719 TTCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATC 974660 Query 115699 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTTCTGTAGAGGTTCTTAATATC 115754 | | || || || ||| | ||||| || || |||| ||| ||| ||||| Sbjct 974659 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATC 974604 Query 115755 ATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCATGAGA---TCCTT 115811 || ||||| | ||| || || || ||||| || | |||| | | ||| Sbjct 974603 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTT---CTCAGCAATGATACGGTTCTT 974547 Query 115812 CATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGA 115867 ||| | | |||||||| || | | || |||| | | ||| | |||| Sbjct 974546 CATGGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGG----TTGA 974491 Query 115868 CAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAA 115927 |||| ||||| || || ||| |||| | | |||||||||| ||||| ||||| | Sbjct 974490 CAACTTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGA 974431 Query 115928 AGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAA 115987 ||||||| ||||| |||| || |||| || ||| || ||||| || || | ||| | Sbjct 974430 AGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCA 974371 Query 115988 GGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTA--GTT 116045 ||||||||| ||| | || | || | |||||||| | |||||| || | | | Sbjct 974370 AGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGT 974311 Query 116046 GAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCC 116105 || | || | |||||||| || || |||||||| || | ||| || || ||||| Sbjct 974310 CAGAG--GGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCC 974253 Query 116106 CTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGC 116165 || |||| || || || ||||| |||| || | || ||||| ||||| || Sbjct 974252 CTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGC 974193 Query 116166 GTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACG 116224 || || || |||||||| || | |||| || | | ||||| || ||||| | Sbjct 974192 ATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAG-CCTCGGGAGACTCAAAGG 974134 Query 116225 CGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGAT 116284 | || || || | || || ||||| |||||||| | ||||| || || | Sbjct 974133 GCATGCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGT 974074 Query 116285 GTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTAT 116344 | | ||| || || || || || || || || ||| ||| || | | | | Sbjct 974073 GGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGT 974014 Query 116345 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAG 116404 | || || | || ||||| |||| |||||||||||| | | ||| | | || Sbjct 974013 TGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTT 973954 Query 116405 TCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCAT 116464 | | || |||||| ||| ||||| | || |||| || || |||| ||||| Sbjct 973953 CGTTGTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCAT 973894 Query 116465 CCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGT 116524 | | || |||||| ||||| || || || | || || || ||||| |||| || Sbjct 973893 CTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGT 973834 Query 116525 TCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCT 116584 |||| || || ||| ||| || ||||||||||||||||| | || | || |||| Sbjct 973833 TCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCT 973774 Query 116585 CCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCT 116643 | || |||| | || || | | ||| | | || | ||| | | || | | | Sbjct 973773 CAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTG-GGCGCGGATGGTCGTGCGACCA 973715 Query 116644 CGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCC-TCTGA 116702 || ||||||| ||| ||||| || | ||||| || || || || | ||| || | Sbjct 973714 CGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCC-ATAGCAGTCAGC 973656 Query 116703 GAGCCCTGGTGCCTTATCTGGA-CAGAAGAGAGACCATTGACCACCCTCCT--CAACCCG 116759 || || || || || ||| || | || | ||| | ||| || | |||| || Sbjct 973655 AAGGCCAGG-GCATTCGTTGGGGCACATCAGCGTCCAGT--CCAAGTTCTTTTCAACACG 973599 Query 116760 CTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTC 116819 |||||||||||| || || |||||||| || ||| | || || ||| | ||||| Sbjct 973598 CTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTC 973539 Query 116820 ATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAG 116879 | || || || || | || | || || | || || |||||||| || || || Sbjct 973538 CTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAG 973479 Query 116880 GTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGT 116933 ||| | || | | || | |||| |||| |||| | ||||| || || || Sbjct 973478 GTAGATGGCAAAGGCACCAGGACGCTTG---TTACCACCCTGATCGACATATCTGGCAGT 973422 Query 116934 TGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAAT 116993 ||| || || |||||||| ||||| ||||| | ||| || || || || ||| Sbjct 973421 GTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAAT 973362 Query 116994 ACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGA 117053 ||| | |||| | || ||||| || || |||||||| || ||| ||| || Sbjct 973361 GTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGA 973302 Query 117054 GATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGC 117113 || || || | | ||| || ||||||| || || || || |||| | | Sbjct 973301 AATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTC 973242 Query 117114 GATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTTGGTG 117172 || | |||||| |||| || ||||| || ||||| |||||||| ||||| || | Sbjct 973241 GACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGG 973183 Query 117173 TCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGGGAAT 117230 || ||| ||| | | |||| |||||| | ||| ||||||| |||| ||| Sbjct 973182 AGGCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAAT 973125 Query 117231 GTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAG 117290 ||| || || || || | || || ||||||| ||||| || || || | | Sbjct 973124 GTCATCTCCCCAGATGCCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAAT 973065 Query 117291 GATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 117334 | ||||| ||| || | ||||| | ||||| ||||||| Sbjct 973064 CTTGCCATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGA 973021 >seq8 Length=2103943 Score = 152 bits (168), Expect = 6e-32 Identities = 532/820 (65%), Gaps = 29/820 (4%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| |||| ||||||||||||||||| ||||| ||| |||| || |||||||| Sbjct 374301 GTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTCCAT 374242 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGT-TGGCACCCCAATCTGTTTGAGGAGAC 127349 || || || ||||| || || | || | | | || | | || |||| Sbjct 374241 GAAGTCGAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACA-AGCAGAC 374183 Query 127350 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 127409 |||| | |||| |||||||||||| |||| | |||||||| || | |||| | Sbjct 374182 GATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGGAGGGCGC 374123 Query 127410 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGT 127469 | ||||| || || | |||| | | |||||| ||||| || | |||| | Sbjct 374122 AAGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATGTCAC 374063 Query 127470 GAATAGTGTCCACCCCAGGTCTATTGCGTAAAGTCTTGA----AGAGTTCCACAG----- 127520 | || ||| | || ||| |||||| ||||| | ||| Sbjct 374062 GGAT------CACTTCCTTGCTGGCGCGGT---TCTTGAGGTGAGAGTGCAGCAGGCAGG 374012 Query 127521 CAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTG 127580 |||| || ||| |||||||||||||| |||||||| || || || ||| |||||| | Sbjct 374011 CAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAG 373952 Query 127581 GCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCC 127640 |||||||||| |||||||| | |||||| || | ||| | || ||||||||| | Sbjct 373951 GCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATAC 373892 Query 127641 CCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACC 127700 |||| || || || |||| || |||| ||||||||| | ||| | | || Sbjct 373891 CCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATCC 373832 Query 127701 ACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGA 127760 |||| || ||||| | ||||| || || || || | ||||| || || | |||| Sbjct 373831 ACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGA 373772 Query 127761 -GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 127818 || || | | ||| | || |||||||| |||| ||||| || || || || Sbjct 373771 GGTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTC 373714 Query 127819 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 127877 | ||||| | | ||| || | ||| | ||||||| | || || ||| |||| Sbjct 373713 GGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCT 373655 Query 127878 GTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAA 127937 | ||||| | ||| | | ||||| ||||| ||||| || | |||| Sbjct 373654 GGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAA 373595 Query 127938 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 127994 | || |||||||| | ||||| | || || | ||||||| || | ||||||| Sbjct 373594 AGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGT 373535 Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| |||||||| || ||||| | ||| || || ||||| Sbjct 373534 CGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 373495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506716863080