Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8 219 7e-52 >seq8 Length=2103943 Score = 219 bits (242), Expect = 7e-52 Identities = 394/569 (69%), Gaps = 10/569 (2%) Strand=Plus/Minus Query 159916 CAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACAT 159975 ||| ||||| ||||||||| |||||| |||||||| |||||||||| ||||||||| | Sbjct 374022 CAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAA 373963 Query 159976 GATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCT 160035 | | || || ||||||| || ||| |||||||| || |||| ||||| |||||||| Sbjct 373962 GGTCAGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT 373903 Query 160036 AAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGT 160095 || ||||| ||||| ||||| ||||| || || || | || |||| || | ||| | Sbjct 373902 GAAGAAGATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTT 373843 Query 160096 GTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGA-TGCACGGCATGCGCTCGA 160154 ||| ||| ||||| | ||||||| || |||||||| |||| |||| || ||| ||| | Sbjct 373842 GTCCTGGATCCACTTGATGGCCCAGTCGGCCTTCTT-GCGAATGCAAGGAATGGTCTCAA 373784 Query 160155 CGGCGTTAAACA---ATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCT 160211 |||||| || | | ||| ||| ||| |||||||| ||| | || ||| Sbjct 373783 TGGCGTTGAAGAGGTAGCTGCGCTGGCTGTTC---TCCTTGATGTAGGTATCGATGAGCA 373727 Query 160212 TCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCG 160271 ||||| | || | ||| | || || || ||||| ||| |||||| || | Sbjct 373726 GGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAG 373667 Query 160272 CCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGT 160331 |||| | ||| ||||| | || | | |||| || | || || | || | Sbjct 373666 CCTCGGGGATCTGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCAT 373607 Query 160332 CGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTC 160391 | | ||| |||||||| |||| | |||||||||||| | ||||||| | ||| || | Sbjct 373606 CAGAGGCGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGC 373547 Query 160392 TCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCA 160450 || | ||||| ||| || || | || || ||||| |||||| ||| |||| | Sbjct 373546 GGTTGTTCCAGTCGTG-CAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAG 373488 Query 160451 GCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 |||| || | |||||||| |||||| Sbjct 373487 GCCTCGGCCTTCTTGTACATTTGCCAGAT 373459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795154573815280