Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq8 219 7e-52
>seq8
Length=2103943
Score = 219 bits (242), Expect = 7e-52
Identities = 394/569 (69%), Gaps = 10/569 (2%)
Strand=Plus/Minus
Query 159916 CAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACAT 159975
||| ||||| ||||||||| |||||| |||||||| |||||||||| ||||||||| |
Sbjct 374022 CAGCAGGCAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAA 373963
Query 159976 GATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCT 160035
| | || || ||||||| || ||| |||||||| || |||| ||||| ||||||||
Sbjct 373962 GGTCAGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT 373903
Query 160036 AAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGT 160095
|| ||||| ||||| ||||| ||||| || || || | || |||| || | ||| |
Sbjct 373902 GAAGAAGATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTT 373843
Query 160096 GTCATGGGTCCACCTTTTGGCCCATTCAGCCTTCTTTGCGA-TGCACGGCATGCGCTCGA 160154
||| ||| ||||| | ||||||| || |||||||| |||| |||| || ||| ||| |
Sbjct 373842 GTCCTGGATCCACTTGATGGCCCAGTCGGCCTTCTT-GCGAATGCAAGGAATGGTCTCAA 373784
Query 160155 CGGCGTTAAACA---ATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCT 160211
|||||| || | | ||| ||| ||| |||||||| ||| | || |||
Sbjct 373783 TGGCGTTGAAGAGGTAGCTGCGCTGGCTGTTC---TCCTTGATGTAGGTATCGATGAGCA 373727
Query 160212 TCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCG 160271
||||| | || | ||| | || || || ||||| ||| |||||| || |
Sbjct 373726 GGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAG 373667
Query 160272 CCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGT 160331
|||| | ||| ||||| | || | | |||| || | || || | || |
Sbjct 373666 CCTCGGGGATCTGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCAT 373607
Query 160332 CGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTC 160391
| | ||| |||||||| |||| | |||||||||||| | ||||||| | ||| || |
Sbjct 373606 CAGAGGCGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGC 373547
Query 160392 TCTTTTCCCAGT-GTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCA 160450
|| | ||||| ||| || || | || || ||||| |||||| ||| |||| |
Sbjct 373546 GGTTGTTCCAGTCGTG-CAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAG 373488
Query 160451 GCCTGAGCAGTTTTGTACATGGCCCAGAT 160479
|||| || | |||||||| ||||||
Sbjct 373487 GCCTCGGCCTTCTTGTACATTTGCCAGAT 373459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154573815280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |