Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq15 241 2e-58
seq3 129 7e-25
seq4 109 7e-19
>seq15
Length=939793
Score = 241 bits (266), Expect = 2e-58
Identities = 468/689 (68%), Gaps = 8/689 (1%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||||||||||||||||||||| || || || || || | ||||| || ||||||||
Sbjct 711890 TCGAAATCTTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 711831
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | | || ||||| || ||||||||||| || || || ||||| |||
Sbjct 711830 TCCTCAATGGTCAGGAGAGAGACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACG 711771
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
|| || | || ||||| || || ||||| ||||| || || || || || ||
Sbjct 711770 TTGCGCTCACCCTCGACCTTCTTGTCAAGGCCGTAGGCGATGGCAGCAGCGGTGGGCTCG 711711
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696
|| || ||||| || ||| || || ||||| | || || || || || || ||
Sbjct 711710 TTGATGATACGCAGGACGTTGAGACCGGCAATGAGACCGGCGTCCTTGGTAGCCTGACGC 711651
Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756
|| ||||| |||||||| ||||| || | ||| |||| |||| | | |||||
Sbjct 711650 TGGCTGTCGTTGAAGTAGGCGGGGACAGTGATGACGGCGTTGTTGACGGTGGTTCCGAGG 711591
Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816
|| || || ||| | || ||| ||||| || | ||| || || ||||| || | |
Sbjct 711590 TAGGACTCGGCGGTCTCACGCATCTTGGTCAGGATCATGGAGGAGATCTCCTCGGGGGTG 711531
Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC-CGGG 7875
|| ||| | || || || || || || || | | ||| || | ||| | |
Sbjct 711530 AAGGTCTTCTTCTCGCCCTTGAACTCGACCTCGACGACGGGCTT----GGAGCCCTTGTC 711475
Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935
|| | ||| | | | | ||||| || | ||||||| ||| | |||||| |
Sbjct 711474 GACGATCTTGAAGGGGAAGTGCTTCATGTCAGCCTGGACCTCGGAGTCGGCAAACTTGCG 711415
Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995
|||||| | ||||| || || || || ||||| | |||||||||||| ||||||||
Sbjct 711414 TCCGATCAATCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTT 711355
Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055
||||| || ||||| | ||| || | || || || || ||| |||| ||||||||
Sbjct 711354 GGCCGCATCACCGATCAAACGCTC---GGTGTCGGTGAAGGCAACGAACGAAGGGGTCGT 711298
Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115
||| || || |||||||| || || || || ||||| | | ||| ||||||||
Sbjct 711297 TCGGTTACCCTGGTCGTTGGCGATGATATCACATCGGTCCTCACGGAAGATACCGACGCA 711238
Query 8116 CGAATACGTTGTTCCTAAATCAATACCGA 8144
|| ||||| || || | || |||||||
Sbjct 711237 GGAGTACGTAGTACCCAGGTCGATACCGA 711209
>seq3
Length=3158035
Score = 129 bits (142), Expect = 7e-25
Identities = 362/548 (66%), Gaps = 21/548 (4%)
Strand=Plus/Minus
Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303
|| ||||| ||||| |||||||| |||| | ||| || | || ||| | | ||
Sbjct 2096210 AGCTCCTCGAAACGAGCACGGGTGATGGTCATGGTGAAGTCCTCACCCTCGAAGAGAGAG 2096151
Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361
||||| |||||||| | || || || | ||| || ||||| || ||||| || |
Sbjct 2096150 TCAATCTCAATGGTGGCCTGGGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCGCAAG 2096093
Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGT---TACCGGAAATATCTTTCTTATGTTTAC 7418
| || || | | || || ||||| |||| | | || || ||||| || |
Sbjct 2096092 CAGTGCGGAGTCTTCGGAGAGCACGGGGGTCGTTGCTGGGG---TCCTTCTTGCTCTTGC 2096036
Query 7419 GTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477
| | ||||| | | |||| || || || | | || || || | |||||||||
Sbjct 2096035 GAGTGAACTCCTTCTTGCAGTGGTCCAACAGGT-TGGTGTCAAAGTCCTGGCCACCCAAG 2095977
Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537
|| || || || ||||| || ||||| |||| ||| || | ||||| | || ||
Sbjct 2095976 TGGGTGTCACCAGCGGTAGCCTTGACGGTGAAGACACCACCCTGGATGTTGAGCAGGGAG 2095917
Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTC 7597
||||| || ||||||||||| || || | || || ||||| || | ||| || |
Sbjct 2095916 ACATCGAAAGTACCACCACCAAGATCGTAGATCAGGACGTTGCGCTCCT--TCTCAGT-C 2095860
Query 7598 TTATCG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651
||| | |||||||| |||||||| || || || || || || || ||||| ||
Sbjct 2095859 TTACCAGCACCCAGACCGTAGGCGATAGCAGCAGCGGTAGGCTCGTTGATGATACGGAGG 2095800
Query 7652 CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAG 7711
||| ||||||||||| | | ||||| || || || || || || ||||| |||
Sbjct 2095799 ACGTTGAGGCCAGCAATGGCACCAGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAG 2095740
Query 7712 TAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATA 7771
||||| ||||| || | ||| || | | || ||||| ||||| | | || || ||
Sbjct 2095739 TAGGCAGGGACAGTGATGACAGCCTTCTCAACCTTCTTGCCGAGCTTGGTCTCAGCAATC 2095680
Query 7772 TCTTTCAT 7779
|| |||||
Sbjct 2095679 TCCTTCAT 2095672
>seq4
Length=2906552
Score = 109 bits (120), Expect = 7e-19
Identities = 341/523 (65%), Gaps = 15/523 (3%)
Strand=Plus/Minus
Query 105558 TTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCT 105617
|||||| || |||||||| | ||| |||||||| | || || | ||| || |
Sbjct 973607 TTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCG 973548
Query 105618 CGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCA 105677
||||||| | || || ||| || | || || || || | | |||||||||||
Sbjct 973547 GACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCA 973488
Query 105678 TGGTTCTAAATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATA 105731
|| || | |||| |||| | || | ||||| || | |||| ||||||
Sbjct 973487 GGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACATA 973431
Query 105732 TCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGT 105791
||| || || ||| ||||||| | ||| ||||||||||| | || || || || ||
Sbjct 973430 TCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGT 973371
Query 105792 TCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGC 105851
||| ||| | || | ||||| | ||| |||| || |||||||| |||||
Sbjct 973370 GCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGC 973311
Query 105852 CCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTC 105911
| ||| || ||||| || | || ||||| ||||| || || ||||| ||
Sbjct 973310 CATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTC 973251
Query 105912 CTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACA 105970
||| | | | || ||| || || |||| || || ||| || ||||| || |||||||
Sbjct 973250 CTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTTGAACA 973192
Query 105971 GAGTTGGTGTTGCATGAATGAACAAACCTT--TCGATAACGCTTCGTATGTTTCCAGGAC 106028
| || || | ||||| |||| || ||| | || | | |||||| ||||||||
Sbjct 973191 GGGTGGGGGAGGCATGGGTGAAGAA--CTTGCTGGACATGAGGTTGTATGTCTCCAGGAC 973134
Query 106029 GTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATA 106071
| ||||| || | ||| || |||| || || ||||||
Sbjct 973133 ACGCTCAATGTCATCTCCCCAGATGCCAACAGACACTCGCATA 973091
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635132299832920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |