Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq15 241 2e-58 seq3 129 7e-25 seq4 109 7e-19 >seq15 Length=939793 Score = 241 bits (266), Expect = 2e-58 Identities = 468/689 (68%), Gaps = 8/689 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||||||||| || || || || || | ||||| || |||||||| Sbjct 711890 TCGAAATCTTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 711831 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || ||||| ||| Sbjct 711830 TCCTCAATGGTCAGGAGAGAGACATCGAAGGTACCACCACCGAGATCGAAGATGAGGACG 711771 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || || | || ||||| || || ||||| ||||| || || || || || || Sbjct 711770 TTGCGCTCACCCTCGACCTTCTTGTCAAGGCCGTAGGCGATGGCAGCAGCGGTGGGCTCG 711711 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| || || ||||| | || || || || || || || Sbjct 711710 TTGATGATACGCAGGACGTTGAGACCGGCAATGAGACCGGCGTCCTTGGTAGCCTGACGC 711651 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| |||||||| ||||| || | ||| |||| |||| | | ||||| Sbjct 711650 TGGCTGTCGTTGAAGTAGGCGGGGACAGTGATGACGGCGTTGTTGACGGTGGTTCCGAGG 711591 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || || || ||| | || ||| ||||| || | ||| || || ||||| || | | Sbjct 711590 TAGGACTCGGCGGTCTCACGCATCTTGGTCAGGATCATGGAGGAGATCTCCTCGGGGGTG 711531 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC-CGGG 7875 || ||| | || || || || || || || | | ||| || | ||| | | Sbjct 711530 AAGGTCTTCTTCTCGCCCTTGAACTCGACCTCGACGACGGGCTT----GGAGCCCTTGTC 711475 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 || | ||| | | | | ||||| || | ||||||| ||| | |||||| | Sbjct 711474 GACGATCTTGAAGGGGAAGTGCTTCATGTCAGCCTGGACCTCGGAGTCGGCAAACTTGCG 711415 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 |||||| | ||||| || || || || ||||| | |||||||||||| |||||||| Sbjct 711414 TCCGATCAATCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTT 711355 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 ||||| || ||||| | ||| || | || || || || ||| |||| |||||||| Sbjct 711354 GGCCGCATCACCGATCAAACGCTC---GGTGTCGGTGAAGGCAACGAACGAAGGGGTCGT 711298 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 ||| || || |||||||| || || || || ||||| | | ||| |||||||| Sbjct 711297 TCGGTTACCCTGGTCGTTGGCGATGATATCACATCGGTCCTCACGGAAGATACCGACGCA 711238 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGA 8144 || ||||| || || | || ||||||| Sbjct 711237 GGAGTACGTAGTACCCAGGTCGATACCGA 711209 >seq3 Length=3158035 Score = 129 bits (142), Expect = 7e-25 Identities = 362/548 (66%), Gaps = 21/548 (4%) Strand=Plus/Minus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| |||| | ||| || | || ||| | | || Sbjct 2096210 AGCTCCTCGAAACGAGCACGGGTGATGGTCATGGTGAAGTCCTCACCCTCGAAGAGAGAG 2096151 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| |||||||| | || || || | ||| || ||||| || ||||| || | Sbjct 2096150 TCAATCTCAATGGTGGCCTGGGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCGCAAG 2096093 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGT---TACCGGAAATATCTTTCTTATGTTTAC 7418 | || || | | || || ||||| |||| | | || || ||||| || | Sbjct 2096092 CAGTGCGGAGTCTTCGGAGAGCACGGGGGTCGTTGCTGGGG---TCCTTCTTGCTCTTGC 2096036 Query 7419 GTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 | | ||||| | | |||| || || || | | || || || | ||||||||| Sbjct 2096035 GAGTGAACTCCTTCTTGCAGTGGTCCAACAGGT-TGGTGTCAAAGTCCTGGCCACCCAAG 2095977 Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537 || || || || ||||| || ||||| |||| ||| || | ||||| | || || Sbjct 2095976 TGGGTGTCACCAGCGGTAGCCTTGACGGTGAAGACACCACCCTGGATGTTGAGCAGGGAG 2095917 Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTC 7597 ||||| || ||||||||||| || || | || || ||||| || | ||| || | Sbjct 2095916 ACATCGAAAGTACCACCACCAAGATCGTAGATCAGGACGTTGCGCTCCT--TCTCAGT-C 2095860 Query 7598 TTATCG------AGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||| | |||||||| |||||||| || || || || || || || ||||| || Sbjct 2095859 TTACCAGCACCCAGACCGTAGGCGATAGCAGCAGCGGTAGGCTCGTTGATGATACGGAGG 2095800 Query 7652 CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAG 7711 ||| ||||||||||| | | ||||| || || || || || || ||||| ||| Sbjct 2095799 ACGTTGAGGCCAGCAATGGCACCAGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAG 2095740 Query 7712 TAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATA 7771 ||||| ||||| || | ||| || | | || ||||| ||||| | | || || || Sbjct 2095739 TAGGCAGGGACAGTGATGACAGCCTTCTCAACCTTCTTGCCGAGCTTGGTCTCAGCAATC 2095680 Query 7772 TCTTTCAT 7779 || ||||| Sbjct 2095679 TCCTTCAT 2095672 >seq4 Length=2906552 Score = 109 bits (120), Expect = 7e-19 Identities = 341/523 (65%), Gaps = 15/523 (3%) Strand=Plus/Minus Query 105558 TTCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCT 105617 |||||| || |||||||| | ||| |||||||| | || || | ||| || | Sbjct 973607 TTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCG 973548 Query 105618 CGCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCA 105677 ||||||| | || || ||| || | || || || || | | ||||||||||| Sbjct 973547 GACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCA 973488 Query 105678 TGGTTCTAAATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATA 105731 || || | |||| |||| | || | ||||| || | |||| |||||| Sbjct 973487 GGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACATA 973431 Query 105732 TCTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGT 105791 ||| || || ||| ||||||| | ||| ||||||||||| | || || || || || Sbjct 973430 TCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGT 973371 Query 105792 TCCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGC 105851 ||| ||| | || | ||||| | ||| |||| || |||||||| ||||| Sbjct 973370 GCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGC 973311 Query 105852 CCACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTC 105911 | ||| || ||||| || | || ||||| ||||| || || ||||| || Sbjct 973310 CATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTC 973251 Query 105912 CTTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTG-GGTGTACCAGCATTGAACA 105970 ||| | | | || ||| || || |||| || || ||| || ||||| || ||||||| Sbjct 973250 CTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTTGAACA 973192 Query 105971 GAGTTGGTGTTGCATGAATGAACAAACCTT--TCGATAACGCTTCGTATGTTTCCAGGAC 106028 | || || | ||||| |||| || ||| | || | | |||||| |||||||| Sbjct 973191 GGGTGGGGGAGGCATGGGTGAAGAA--CTTGCTGGACATGAGGTTGTATGTCTCCAGGAC 973134 Query 106029 GTGATCAATATCGTGTCCATGAATACCAATAGCGACGCGCATA 106071 | ||||| || | ||| || |||| || || |||||| Sbjct 973133 ACGCTCAATGTCATCTCCCCAGATGCCAACAGACACTCGCATA 973091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132299832920