Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 221 1e-52 seq8 161 1e-34 >seq4 Length=2906552 Score = 221 bits (244), Expect = 1e-52 Identities = 917/1430 (64%), Gaps = 25/1430 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| | ||||| || | | || ||| || || || ||||| ||| Sbjct 973077 CCACAGCACATGATTATGCGAGTGTCTGTTGGCATCTGGGGAGATGACATTGAGCGTGTC 973136 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 ||||||||||| || |||||| | | |||| ||| || | || ||||| ||| Sbjct 973137 CTGGAGACATACAACCTCATGTCCAGCAAGTTCTTCACCCATGCCTCCCCCACCCTGTTC 973196 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| ||||| || |||| ||||| || ||| | | | | ||||| ||| Sbjct 973197 AACGCAGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGACGAT 973256 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| |||||| | ||||||| || || ||| ||||||| Sbjct 973257 AGCATTGAGGGTATCTACGACACTCTGAAGACATGTGCCATGATTTCCAAGATGGCTGGT 973316 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGTACAAAT 111911 ||||| || || || |||| || | |||| | ||| ||| || || || Sbjct 973317 GGTATTGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACCAAC 973376 Query 111912 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 111971 ||| || | ||||||||||| |||||||| || || ||| ||| || | ||||| Sbjct 973377 GGTACCTCTAACGGTATTATTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATATGTC 973436 Query 111972 AACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 112025 | || | ||| ||||| || | | || |||| || ||||| |||||| Sbjct 973437 GATCAGGGTGGTAACAAGCGTC---CTGGTGCCTTTGCCATCTACCTCGAGCCCTGGCAC 973493 Query 112026 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC 112085 || || || | ||||||||||| | || ||||| || | || |||| || | Sbjct 973494 GCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGCGCC 973553 Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA-- 112143 || || | ||| |||||||||||||| ||||||||||||||| | ||||| ||| Sbjct 973554 CGTGACTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAAAAGAAC 973613 Query 112144 GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGA-TGCCGTGGG 112201 ||| | ||| | || | || || || || || || || || | || ||| | || Sbjct 973614 TTGG--ACTGGACGCTGATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTAT-GG 973669 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGT 112261 ||||| || || || | || ||||| ||| | || | || | |||| | Sbjct 973670 CGAGGAATTCGAGGCTTTGTATGAGAAGTATGAGAAGGAGGGACGTGGTCGCACGACCAT 973729 Query 112262 GCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320 | || | || | ||||| | | || || | | || || |||||||||| || | Sbjct 973730 CCGCGC-CCAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACTGAGACTGGTAACCCCT 973788 Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380 ||||| ||||| || ||||| |||| ||||| || || ||||| |||| ||| Sbjct 973789 TCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCATCC 973848 Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440 || ||||||||||| || || || | || | | ||||||| ||||| | Sbjct 973849 GCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTGTGCTCCAGATGAGGTTGCTGTTT 973908 Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATTTGA 112498 | ||| | || || | || ||||| ||||| ||| | | || ||| | | ||| Sbjct 973909 GCAACTTGGCCTCTTTGGCCCTCCCTGCTTATGTCGAT-TACA-ACGAAGGCTGCTATGA 973966 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 | | | || || || ||||| || || || ||||| |||| | ||||| Sbjct 973967 CTTTAAGAAGCTTCATGAAGTCACCAAGGTGGTTGTCCGCAACCTCAACAAGATCATTGA 974026 Query 112559 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 112618 | ||| ||||| || || || || || || ||| | ||||| || ||||| Sbjct 974027 TGTCAATCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCACCGACCCATTGG 974086 Query 112619 TCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTCCG 112677 | | |||||||| ||||| || || | ||| || | || ||| | ||||| || Sbjct 974087 TGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCCCTG-CGCATGCCCTTTGAGTCTC 974145 Query 112678 ACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGG 112737 ||| || | | || || || |||||||| || || || || || ||||||| Sbjct 974146 CCGAGGCTCGTCAGCTGAACAAGCAGATCTTTGAGACCATCTACCATGCGGCCCTTGAGG 974205 Query 112738 CGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTT 112797 | | |||| | || |||| || ||||| || ||| | || |||| || || || | Sbjct 974206 CTTCTATGGAGATCGCCAAGGTGGAGGGTCCCTACGAATCATTCAAGGGATCACCTGCAT 974265 Query 112798 CACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTGGG 112857 | | || | || ||||| || |||||||| | || || | | || |||| Sbjct 974266 CCGAGGGCATCCTCCAATTCGACATGTGGGATGTCAAGCCCTCTGACCTGTGGGAGTGGG 974325 Query 112858 ACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 112917 || | |||||||| | ||||||||| | ||| || ||||| | | | || || | Sbjct 974326 ACTCGCTCAAGGAGCAGATCAAGGAGCACGGTACGCGCAACAGCTTGCTCCTCGCCCCTA 974385 Query 112918 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 112977 ||||||| ||| || | || || |||| || || || ||||| || |||||||| Sbjct 974386 TGCCAACTGCCAGTACGTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTACACTT 974445 Query 112978 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 | |||||||| | | || | ||| || || ||||| |||||||| Sbjct 974446 CCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAAGTTGTCAAC 974495 >seq8 Length=2103943 Score = 161 bits (178), Expect = 1e-34 Identities = 357/523 (68%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 101873 ||||| || |||||| | ||||| || |||||| || |||| ||||| | | | || Sbjct 373495 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 373554 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || | || ||| | ||||| |||||||||| |||||||| | || ||||| ||| Sbjct 373555 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATT 373614 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992 || ||||| | | |||| || ||||| || |||| | || || ||| Sbjct 373615 GTCAACGAGAACCTGGTCGAGCGCTTTAGTGGCGAGGTCCAGATCCCC-GAGGCTCGATG 373673 Query 101993 TTTCTATGCGTATCAATGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||| | | || | |||| ||| | | | || ||||| ||| |||| Sbjct 373674 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 373732 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAA-GAAGC-AGCTCTTTGAAGCCATCCAAAC 102109 | || | || || ||||| | | | | | ||| | ||||| | ||||| | || Sbjct 373733 TCGATACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 373790 Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 102168 |||| || |||| ||||| || || ||||| || |||||| | | |||| | | Sbjct 373791 CATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAACTC 373850 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 ||||||||| |||| || | || ||||| |||||||||||||||||| ||| Sbjct 373851 -TTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTG 373909 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 |||| | | || | |||||||||||||||||||||||||| ||||| ||| |||| Sbjct 373910 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 373969 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||||| ||||||||||||||||| || ||| || ||||| Sbjct 373970 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGC 374012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741911165360