Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq4 260 2e-64
seq8 100 3e-16
seq15 84.2 3e-11
>seq4
Length=2906552
Score = 260 bits (288), Expect = 2e-64
Identities = 1034/1604 (64%), Gaps = 61/1604 (4%)
Strand=Plus/Minus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559
||||| ||||| |||||||| ||||| |||||||||||| ||||| | || ||
Sbjct 974708 GTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATCTGGA-----CA 974654
Query 109560 CTTTTG-GCT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATG 109614
||| | ||| ||| |||||||| |||||||| | ||||||||| ||||| |||
Sbjct 974653 ATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCTTCGGGGATG 974594
Query 109615 TCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTT 109670
| |||||| ||||| ||||| | ||| || ||| | | |||||| | |
Sbjct 974593 TTGGGGATGTTCTGAATGGAGCC----GTTCTCAGCAATGATACGGTTCTTCATGGCATC 974538
Query 109671 CGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTC 109730
|||||||| ||| | || || | | ||| |||||| || || ||
Sbjct 974537 GGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTC 974478
Query 109731 ACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTT 109790
|| ||||| ||||| |||||||||| | |||||||| ||||| ||||| |||||
Sbjct 974477 GCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTT 974418
Query 109791 GCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAG 109850
||| || || || | || || || ||||| || || | ||| | ||||| ||
Sbjct 974417 GCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGTTGCGCGT 974358
Query 109851 ACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT 109910
||| | | ||| | | |||| | | |||||| || |||| | | ||
Sbjct 974357 ACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTC-------CCAC--AGGTCAGA 974307
Query 109911 ---CTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAA 109967
|| |||||||||| || ||| || | ||||| | ||||| || ||||||||
Sbjct 974306 GGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAA 974247
Query 109968 ACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATA 110027
||||| | ||||| |||| ||| | ||| |||||||| || |||||||| ||
Sbjct 974246 TGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGGTA 974187
Query 110028 CATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACC 110087
|| |||||||| || || |||| | |||| ||| | | || ||||| | |
Sbjct 974186 GATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAGGGCATGCG 974127
Query 110088 ACAAAG-AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCA 110146
|| | || || | || || |||||||| ||||| | ||||||||| || || ||
Sbjct 974126 -CAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCGCA 974068
Query 110147 TGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGAT 110206
|||| | || || | || ||||| ||| || |||| | ||||| |
Sbjct 974067 TGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGTTGAGGT 974008
Query 110207 TCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTC---GTAATCGAACGTTTTCGTCT 110263
| || ||| |||| |||||| || || | || || | | | |||||
Sbjct 974007 TGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCA-GCCTTCGTTG 973949
Query 110264 CCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTT 110323
| || |||||| ||||| || | ||| || | ||||| |||| | ||| |||
Sbjct 973948 --TAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTG 973891
Query 110324 TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCT 110383
| ||| || | ||| || || || | |||||| || ||| |||| |||||
Sbjct 973890 GAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCT 973831
Query 110384 TCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCG 110443
|||| || ||| |||||| |||||||| ||||||||| | ||| ||||||| || |
Sbjct 973830 TCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAG 973771
Query 110444 TCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGA 110502
|||| | | || |||| | ||| | | || | |||| ||| || | | | | |
Sbjct 973770 TCTGGGCTTCCAGGATGGAATACCACAGCTTCTG-GGCGCGGATGGTCGTGCGACCACGT 973712
Query 110503 CCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGA 110562
|| |||| ||| ||||| ||||| |||| ||||||| || || |||| |||
Sbjct 973711 CCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCCATAGCAGTCAGCAAGG 973652
Query 110563 CCCTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCT--CAACCCTCTTC 110619
|| || || || ||| || | || | ||| | ||| || | |||| | ||||
Sbjct 973651 CCAGG-GCATTCGTTGGGGCACATCAGCGTCCAGT--CCAAGTTCTTTTCAACACGCTTC 973595
Query 110620 ATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCA 110679
||||| || || |||||||| | || ||| | ||||||| || ||||||| |
Sbjct 973594 ATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTG 973535
Query 110680 CCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAG 110739
|| ||||| ||| || || | || || | || || | |||||| || ||||| |||
Sbjct 973534 CCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAG 973475
Query 110740 ACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCA 110793
| || | || || | |||| ||| |||| | ||||| | || |||
Sbjct 973474 ATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTG 973418
Query 110794 TTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTG 110853
||||| || | ||||| |||||||| || | || ||| || || || |||
Sbjct 973417 TTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAA 973358
Query 110854 GACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATT 110913
|| ||||||| ||| ||||| | || ||||||||||| ||| ||| |||
Sbjct 973357 GAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATC 973298
Query 110914 TGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAAT 110972
||||| ||| | || || | || ||||| ||||| ||| |||| || | |
Sbjct 973297 ATGGCACATGTCT-TCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGAC 973239
Query 110973 TAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGC 111032
| ||||| || |||| ||| | | || || || || ||||| || || || | ||
Sbjct 973238 CAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGC 973179
Query 111033 ATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074
||| ||| ||| |||| |||||| ||||||||| || ||
Sbjct 973178 ATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCCAG 973137
>seq8
Length=2103943
Score = 100 bits (110), Expect = 3e-16
Identities = 363/556 (65%), Gaps = 14/556 (3%)
Strand=Plus/Minus
Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554
|||||| || || || || || || |||||||||||||| || ||| || ||
Sbjct 374013 GGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 373954
Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614
||||||||| |||| ||||| ||||| ||||||| ||| || ||||||||
Sbjct 373953 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 373894
Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670
||||| || ||| || || | || |||| || ||||| ||| |||||| ||
Sbjct 373893 ACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGC-AAAGGAAGAGTTCTTGTCCTGGA 373835
Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730
|||||||| ||||||| |||||| ||||| || | || | ||||| | ||
Sbjct 373834 TCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGA 373775
Query 119731 A-AAGTTGCTTC-TTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788
| | || ||| | | | | | ||||| || || |||| ||||| ||||||||
Sbjct 373774 AGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGT 373717
Query 119789 CTCACCATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847
||| || | | | ||| || ||| || | || || | ||||| |||| |
Sbjct 373716 CTCGGAGTGGATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGA 373658
Query 119848 TTTGCACTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAG 119907
| || || ||| || ||| | | | || || ||||| ||||| || | |
Sbjct 373657 TCTGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGG 373598
Query 119908 CGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTCC 119964
| ||||| || | ||||| ||||| | || || | |||||| || ||| ||||
Sbjct 373597 CAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCC 373538
Query 119965 AGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCT 120024
|||||| || ||| || |||| || | |||||| || |||||| ||| || ||||
Sbjct 373537 AGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGCCT 373478
Query 120025 TTTTATAGAGTTCCCA 120040
| || || | || |||
Sbjct 373477 TCTTGTACATTTGCCA 373462
>seq15
Length=939793
Score = 84.2 bits (92), Expect = 3e-11
Identities = 195/294 (66%), Gaps = 0/294 (0%)
Strand=Plus/Plus
Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735
||| | |||||| | || |||||||| | |||| || ||||| ||| |
Sbjct 471646 ACCAATAGCGTCGAGTTCGTCGATGAAGATGATAGCAGGGGACTTGGCTTTGGCCGCCGC 471705
Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795
|| || || || |||||||| || || ||||| || || || ||| |||| | | |
Sbjct 471706 AAATAGCTCTCGGACACGCTTGGCGCCGACACCAACAAAGATTTCATCGAATTCACTGCC 471765
Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855
||| | | ||| ||||| | ||| ||||||| ||||||||||| || |||||
Sbjct 471766 AGACATGTAGAAGAATGGAACGCCGGCCTCTCCAGCGACAGCTCGAGCGAGCAGCGTCTT 471825
Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAA 11915
|| |||||||| | ||| |||| || | || ||||| ||||||||| || |
Sbjct 471826 TCCAGTACCAGGGGGTCCAACGAGGAGAACACCTTTGGGGAGCTTGGCACCCAAATCAGA 471885
Query 11916 GTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969
| ||| || || || || || || || | ||||| || || ||||| ||
Sbjct 471886 GAAGCCATCCGGGTTACGAAGAAATTCGACCACCTCCTGTAGCTCTTCCTTAGC 471939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975536181400
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