Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 260 2e-64 seq8 100 3e-16 seq15 84.2 3e-11 >seq4 Length=2906552 Score = 260 bits (288), Expect = 2e-64 Identities = 1034/1604 (64%), Gaps = 61/1604 (4%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 ||||| ||||| |||||||| ||||| |||||||||||| ||||| | || || Sbjct 974708 GTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATCTGGA-----CA 974654 Query 109560 CTTTTG-GCT----AATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATG 109614 ||| | ||| ||| |||||||| |||||||| | ||||||||| ||||| ||| Sbjct 974653 ATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCTTCGGGGATG 974594 Query 109615 TCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTT 109670 | |||||| ||||| ||||| | ||| || ||| | | |||||| | | Sbjct 974593 TTGGGGATGTTCTGAATGGAGCC----GTTCTCAGCAATGATACGGTTCTTCATGGCATC 974538 Query 109671 CGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTC 109730 |||||||| ||| | || || | | ||| |||||| || || || Sbjct 974537 GGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTC 974478 Query 109731 ACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTT 109790 || ||||| ||||| |||||||||| | |||||||| ||||| ||||| ||||| Sbjct 974477 GCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTT 974418 Query 109791 GCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAG 109850 ||| || || || | || || || ||||| || || | ||| | ||||| || Sbjct 974417 GCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGTTGCGCGT 974358 Query 109851 ACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT 109910 ||| | | ||| | | |||| | | |||||| || |||| | | || Sbjct 974357 ACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTC-------CCAC--AGGTCAGA 974307 Query 109911 ---CTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAA 109967 || |||||||||| || ||| || | ||||| | ||||| || |||||||| Sbjct 974306 GGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAA 974247 Query 109968 ACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATA 110027 ||||| | ||||| |||| ||| | ||| |||||||| || |||||||| || Sbjct 974246 TGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGGTA 974187 Query 110028 CATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACC 110087 || |||||||| || || |||| | |||| ||| | | || ||||| | | Sbjct 974186 GATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAGGGCATGCG 974127 Query 110088 ACAAAG-AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCA 110146 || | || || | || || |||||||| ||||| | ||||||||| || || || Sbjct 974126 -CAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCGCA 974068 Query 110147 TGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGAT 110206 |||| | || || | || ||||| ||| || |||| | ||||| | Sbjct 974067 TGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGTTGAGGT 974008 Query 110207 TCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTC---GTAATCGAACGTTTTCGTCT 110263 | || ||| |||| |||||| || || | || || | | | ||||| Sbjct 974007 TGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCA-GCCTTCGTTG 973949 Query 110264 CCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTT 110323 | || |||||| ||||| || | ||| || | ||||| |||| | ||| ||| Sbjct 973948 --TAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTG 973891 Query 110324 TGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCT 110383 | ||| || | ||| || || || | |||||| || ||| |||| ||||| Sbjct 973890 GAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCT 973831 Query 110384 TCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCG 110443 |||| || ||| |||||| |||||||| ||||||||| | ||| ||||||| || | Sbjct 973830 TCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAG 973771 Query 110444 TCTGTGACTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGA 110502 |||| | | || |||| | ||| | | || | |||| ||| || | | | | | Sbjct 973770 TCTGGGCTTCCAGGATGGAATACCACAGCTTCTG-GGCGCGGATGGTCGTGCGACCACGT 973712 Query 110503 CCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGA 110562 || |||| ||| ||||| ||||| |||| ||||||| || || |||| ||| Sbjct 973711 CCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCCATAGCAGTCAGCAAGG 973652 Query 110563 CCCTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCT--CAACCCTCTTC 110619 || || || || ||| || | || | ||| | ||| || | |||| | |||| Sbjct 973651 CCAGG-GCATTCGTTGGGGCACATCAGCGTCCAGT--CCAAGTTCTTTTCAACACGCTTC 973595 Query 110620 ATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCA 110679 ||||| || || |||||||| | || ||| | ||||||| || ||||||| | Sbjct 973594 ATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTG 973535 Query 110680 CCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAG 110739 || ||||| ||| || || | || || | || || | |||||| || ||||| ||| Sbjct 973534 CCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAG 973475 Query 110740 ACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCA 110793 | || | || || | |||| ||| |||| | ||||| | || ||| Sbjct 973474 ATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTG 973418 Query 110794 TTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTG 110853 ||||| || | ||||| |||||||| || | || ||| || || || ||| Sbjct 973417 TTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAA 973358 Query 110854 GACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATT 110913 || ||||||| ||| ||||| | || ||||||||||| ||| ||| ||| Sbjct 973357 GAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATC 973298 Query 110914 TGTGCACA-CTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAAT 110972 ||||| ||| | || || | || ||||| ||||| ||| |||| || | | Sbjct 973297 ATGGCACATGTCT-TCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGAC 973239 Query 110973 TAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGC 111032 | ||||| || |||| ||| | | || || || || ||||| || || || | || Sbjct 973238 CAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGC 973179 Query 111033 ATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAG 111074 ||| ||| ||| |||| |||||| ||||||||| || || Sbjct 973178 ATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCCAG 973137 >seq8 Length=2103943 Score = 100 bits (110), Expect = 3e-16 Identities = 363/556 (65%), Gaps = 14/556 (3%) Strand=Plus/Minus Query 119495 GGCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCC 119554 |||||| || || || || || || |||||||||||||| || ||| || || Sbjct 374013 GGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 373954 Query 119555 AGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGAT 119614 ||||||||| |||| ||||| ||||| ||||||| ||| || |||||||| Sbjct 373953 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 373894 Query 119615 GCCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC---GA 119670 ||||| || ||| || || | || |||| || ||||| ||| |||||| || Sbjct 373893 ACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGC-AAAGGAAGAGTTCTTGTCCTGGA 373835 Query 119671 ACCACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGA 119730 |||||||| ||||||| |||||| ||||| || | || | ||||| | || Sbjct 373834 TCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGA 373775 Query 119731 A-AAGTTGCTTC-TTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGT 119788 | | || ||| | | | | | ||||| || || |||| ||||| |||||||| Sbjct 373774 AGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGT 373717 Query 119789 CTCACCATGAACCAT-TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAA 119847 ||| || | | | ||| || ||| || | || || | ||||| |||| | Sbjct 373716 CTCGGAGTGGATGTTCTCCATCATG-ATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGA 373658 Query 119848 TTTGCACTTCGTCAGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAG 119907 | || || ||| || ||| | | | || || ||||| ||||| || | | Sbjct 373657 TCTGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGG 373598 Query 119908 CGAAGAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAG--TGTT-TTCC 119964 | ||||| || | ||||| ||||| | || || | |||||| || ||| |||| Sbjct 373597 CAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCC 373538 Query 119965 AGTCGTCCATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCT 120024 |||||| || ||| || |||| || | |||||| || |||||| ||| || |||| Sbjct 373537 AGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCAGAAAGAGGCCTCGGCCT 373478 Query 120025 TTTTATAGAGTTCCCA 120040 | || || | || ||| Sbjct 373477 TCTTGTACATTTGCCA 373462 >seq15 Length=939793 Score = 84.2 bits (92), Expect = 3e-11 Identities = 195/294 (66%), Gaps = 0/294 (0%) Strand=Plus/Plus Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTC 11735 ||| | |||||| | || |||||||| | |||| || ||||| ||| | Sbjct 471646 ACCAATAGCGTCGAGTTCGTCGATGAAGATGATAGCAGGGGACTTGGCTTTGGCCGCCGC 471705 Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795 || || || || |||||||| || || ||||| || || || ||| |||| | | | Sbjct 471706 AAATAGCTCTCGGACACGCTTGGCGCCGACACCAACAAAGATTTCATCGAATTCACTGCC 471765 Query 11796 AGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTT 11855 ||| | | ||| ||||| | ||| ||||||| ||||||||||| || ||||| Sbjct 471766 AGACATGTAGAAGAATGGAACGCCGGCCTCTCCAGCGACAGCTCGAGCGAGCAGCGTCTT 471825 Query 11856 ACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAA 11915 || |||||||| | ||| |||| || | || ||||| ||||||||| || | Sbjct 471826 TCCAGTACCAGGGGGTCCAACGAGGAGAACACCTTTGGGGAGCTTGGCACCCAAATCAGA 471885 Query 11916 GTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969 | ||| || || || || || || || | ||||| || || ||||| || Sbjct 471886 GAAGCCATCCGGGTTACGAAGAAATTCGACCACCTCCTGTAGCTCTTCCTTAGC 471939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975536181400