Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq4 239 5e-58
seq8 113 5e-20
>seq4
Length=2906552
Score = 239 bits (264), Expect = 5e-58
Identities = 931/1435 (65%), Gaps = 49/1435 (3%)
Strand=Plus/Minus
Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954
|||||||| ||||| || || ||| | || | | |||||||| | ||||||||
Sbjct 974495 GTTGACAACTTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGG 974436
Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014
|| ||||| || || || |||| || || | || ||| |||||||| || || |
Sbjct 974435 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAG 974376
Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074
| | ||||| || ||| | |||||||| | |||||||| ||||| || |
Sbjct 974375 GAGCAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCA 974316
Query 106075 --GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132
| | || || || || | ||||||| || ||||| || | || | ||| | ||
Sbjct 974315 CAGGTCAGAG-GGCTTGACAT-CCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGT 974258
Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCCAG 106191
|| |||| |||| || |||| ||| | | | || | || | || ||||| ||
Sbjct 974257 GATCCCTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAA-GCCTCAAG 974199
Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251
|| || || || ||||| |||||||| | |||| || || || || ||
Sbjct 974198 GGCCGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTC 974139
Query 106252 AAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306
||| |||| || |||| | || | || || ||||| || ||||| | ||||
Sbjct 974138 AAAGGGCATGCGCAG-GGCA----AGGAAAGCGTCGGCAAGACCCTGGACACCAACACCA 974084
Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366
|| |||| ||| ||||| || || || || || || || || ||| |||
Sbjct 974083 ATGGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCA 974024
Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426
|||| ||| || || | ||| | ||| |||| ||||||||| || | | | |||
Sbjct 974023 ATGATCTTGTTGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCA 973964
Query 106427 AAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACA 106486
| || | | || |||||| || ||||| | || ||||| |||||||||
Sbjct 973963 TAGCAGCCTTCGTTGTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACA 973904
Query 106487 GCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATC 106546
|| |||||| | | |||||| | ||| || || || | |||||| || ||
Sbjct 973903 GCAACCTCATCTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATG 973844
Query 106547 GTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGC 106606
|| |||| ||||| ||||| ||||| |||||| |||||||||||||||||| ||||
Sbjct 973843 GTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGG 973784
Query 106607 GTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAAT 106665
| || ||||| ||||| | | || || | | ||||| | || | ||| | ||
Sbjct 973783 TTACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTG-GGCGCG---GAT 973728
Query 106666 GG-CGTTGG--CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722
|| ||| | | ||||||||| ||| ||||| || | || || || ||||| |
Sbjct 973727 GGTCGTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTC-GC 973669
Query 106723 CACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCA--C 106778
|| || ||| | || || || || || || || || | || | ||| | |||
Sbjct 973668 CATAGCAGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATCAGCGTCCA--GTCCAAGT 973612
Query 106779 CCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG-GGATGAAAAGAGATCTCTA 106837
|| ||||| ||||||||||| || || |||||||| || | | | || || || |
Sbjct 973611 TCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAG-TCACGG 973553
Query 106838 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 106897
|| ||||||| | || ||||| || | ||||||||||| | || || |||
Sbjct 973552 GCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCG 973493
Query 106898 TGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTT 106951
||||| ||||| || |||| || | | || ||||| ||| | ||||
Sbjct 973492 TGCCAGGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCG 973436
Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011
||||| | || ||| ||| || || |||||||| ||||||||||| | || |||
Sbjct 973435 ACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCG 973376
Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071
|| || || ||| ||| |||| | | |||| || || ||||||||
Sbjct 973375 TTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCA 973316
Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131
|||||| ||| || || ||||| | | ||||| | |||||||| | ||
Sbjct 973315 CCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTA 973256
Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATT 107190
|| ||||| || ||| | |||||| ||||| ||| || || || ||||| || ||
Sbjct 973255 TCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTT 973197
Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCC 107248
||| ||||| || | || || ||| | | |||| |||||| || ||||||||||
Sbjct 973196 GAACAGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCC 973139
Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303
| |||| |||||||| || || |||||| | | ||| ||||||| |||||
Sbjct 973138 AGGACACGCTCAATGTCATCTCCCCAGATGCCAACAGACACTCGCATAATCATGT 973084
>seq8
Length=2103943
Score = 113 bits (124), Expect = 5e-20
Identities = 347/526 (66%), Gaps = 17/526 (3%)
Strand=Plus/Minus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || ||| |||||||| || || || || || || || || ||| || ||
Sbjct 374013 GGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 373954
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||||||||| |||||||| | ||| | || | | || | ||| |||||||||
Sbjct 373953 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 373894
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449
|||||| || ||||| |||| ||||||| ||| ||||| ||| || ||||
Sbjct 373893 ACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 373837
Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509
| ||| || || ||||| | |||||||| ||| || || | || | ||||| |
Sbjct 373836 GATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 373777
Query 117510 AAATAACT-GCTTC-TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATAT 117567
|| | | ||| | | | | || ||||| ||||| | || || | || ||
Sbjct 373776 GAAGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTATCGATGAGCAGGGAGTAG 373719
Query 117568 GTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCT 117626
|| ||| || | | | ||| ||| | || | ||||||| | || || |||
Sbjct 373718 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGG 373660
Query 117627 TATCTGCACTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACC 117685
||||| || || || | ||| | | | ||||| ||||| ||||| ||
Sbjct 373659 GATCTGGACCTC-GCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGG 373601
Query 117686 CAGCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCT 117742
| |||||||| |||||||||| ||||| | ||| || | || |||| || | |
Sbjct 373600 CGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGT 373541
Query 117743 TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
||||||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 373540 TCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 373495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980335390120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |