Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4 239 5e-58 seq8 113 5e-20 >seq4 Length=2906552 Score = 239 bits (264), Expect = 5e-58 Identities = 931/1435 (65%), Gaps = 49/1435 (3%) Strand=Plus/Minus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954 |||||||| ||||| || || ||| | || | | |||||||| | |||||||| Sbjct 974495 GTTGACAACTTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGG 974436 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || ||||| || || || |||| || || | || ||| |||||||| || || | Sbjct 974435 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAG 974376 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074 | | ||||| || ||| | |||||||| | |||||||| ||||| || | Sbjct 974375 GAGCAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCA 974316 Query 106075 --GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132 | | || || || || | ||||||| || ||||| || | || | ||| | || Sbjct 974315 CAGGTCAGAG-GGCTTGACAT-CCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGT 974258 Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCCAG 106191 || |||| |||| || |||| ||| | | | || | || | || ||||| || Sbjct 974257 GATCCCTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAA-GCCTCAAG 974199 Query 106192 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 106251 || || || || ||||| |||||||| | |||| || || || || || Sbjct 974198 GGCCGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTC 974139 Query 106252 AAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 106306 ||| |||| || |||| | || | || || ||||| || ||||| | |||| Sbjct 974138 AAAGGGCATGCGCAG-GGCA----AGGAAAGCGTCGGCAAGACCCTGGACACCAACACCA 974084 Query 106307 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 106366 || |||| ||| ||||| || || || || || || || || ||| ||| Sbjct 974083 ATGGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCA 974024 Query 106367 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 106426 |||| ||| || || | ||| | ||| |||| ||||||||| || | | | ||| Sbjct 974023 ATGATCTTGTTGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCA 973964 Query 106427 AAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACA 106486 | || | | || |||||| || ||||| | || ||||| ||||||||| Sbjct 973963 TAGCAGCCTTCGTTGTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACA 973904 Query 106487 GCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATC 106546 || |||||| | | |||||| | ||| || || || | |||||| || || Sbjct 973903 GCAACCTCATCTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATG 973844 Query 106547 GTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGC 106606 || |||| ||||| ||||| ||||| |||||| |||||||||||||||||| |||| Sbjct 973843 GTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGG 973784 Query 106607 GTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAAT 106665 | || ||||| ||||| | | || || | | ||||| | || | ||| | || Sbjct 973783 TTACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTG-GGCGCG---GAT 973728 Query 106666 GG-CGTTGG--CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722 || ||| | | ||||||||| ||| ||||| || | || || || ||||| | Sbjct 973727 GGTCGTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTC-GC 973669 Query 106723 CACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCA--C 106778 || || ||| | || || || || || || || || | || | ||| | ||| Sbjct 973668 CATAGCAGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATCAGCGTCCA--GTCCAAGT 973612 Query 106779 CCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG-GGATGAAAAGAGATCTCTA 106837 || ||||| ||||||||||| || || |||||||| || | | | || || || | Sbjct 973611 TCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAG-TCACGG 973553 Query 106838 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 106897 || ||||||| | || ||||| || | ||||||||||| | || || ||| Sbjct 973552 GCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCG 973493 Query 106898 TGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTT 106951 ||||| ||||| || |||| || | | || ||||| ||| | |||| Sbjct 973492 TGCCAGGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCG 973436 Query 106952 ACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCA 107011 ||||| | || ||| ||| || || |||||||| ||||||||||| | || ||| Sbjct 973435 ACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCG 973376 Query 107012 TTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCC 107071 || || || ||| ||| |||| | | |||| || || |||||||| Sbjct 973375 TTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCA 973316 Query 107072 CCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAG 107131 |||||| ||| || || ||||| | | ||||| | |||||||| | || Sbjct 973315 CCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTA 973256 Query 107132 TCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATT 107190 || ||||| || ||| | |||||| ||||| ||| || || || ||||| || || Sbjct 973255 TCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTT 973197 Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCC 107248 ||| ||||| || | || || ||| | | |||| |||||| || |||||||||| Sbjct 973196 GAACAGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCC 973139 Query 107249 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 | |||| |||||||| || || |||||| | | ||| ||||||| ||||| Sbjct 973138 AGGACACGCTCAATGTCATCTCCCCAGATGCCAACAGACACTCGCATAATCATGT 973084 >seq8 Length=2103943 Score = 113 bits (124), Expect = 5e-20 Identities = 347/526 (66%), Gaps = 17/526 (3%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| || ||| |||||||| || || || || || || || || ||| || || Sbjct 374013 GGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 373954 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| | || | | || | ||| ||||||||| Sbjct 373953 AGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 373894 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449 |||||| || ||||| |||| ||||||| ||| ||||| ||| || |||| Sbjct 373893 ACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 373837 Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509 | ||| || || ||||| | |||||||| ||| || || | || | ||||| | Sbjct 373836 GATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 373777 Query 117510 AAATAACT-GCTTC-TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATAT 117567 || | | ||| | | | | || ||||| ||||| | || || | || || Sbjct 373776 GAAGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTATCGATGAGCAGGGAGTAG 373719 Query 117568 GTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCT 117626 || ||| || | | | ||| ||| | || | ||||||| | || || ||| Sbjct 373718 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGG 373660 Query 117627 TATCTGCACTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACC 117685 ||||| || || || | ||| | | | ||||| ||||| ||||| || Sbjct 373659 GATCTGGACCTC-GCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGG 373601 Query 117686 CAGCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCT 117742 | |||||||| |||||||||| ||||| | ||| || | || |||| || | | Sbjct 373600 CGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGT 373541 Query 117743 TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 ||||||||| ||||| ||||||| ||||| ||||| || ||||| Sbjct 373540 TCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 373495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980335390120