Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq7 147 5e-30
seq3 129 1e-24
seq2 111 3e-19
seq4 86.0 1e-11
>seq7
Length=2414983
Score = 147 bits (162), Expect = 5e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| |||| || |||| ||||| ||
Sbjct 819888 ACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCC 819829
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| |||||||| | ||| || ||||| || |||||||| || ||||| ||
Sbjct 819828 AGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 819769
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || |||||||| ||| ||||| |||||||| | ||||||
Sbjct 819768 ATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTC 819709
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 819708 CCCGTGAGGGTCTTGACGAAAATCTGCAT 819680
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || |||||||| || || || ||||| |||| ||||||| ||||| |||
Sbjct 116142 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGGCCATCCTCG 116083
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|| ||||| || ||||| || || || || ||||| ||||||||||| || ||||| ||
Sbjct 116082 AGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 116023
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || ||||| || ||| ||||| || ||||| | |||||
Sbjct 116022 ATCTTGGACTTCACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTG 115963
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | ||||||
Sbjct 115962 CCGGTGAGGGTCTTGACGAAGATTTGCAT 115934
>seq3
Length=3158035
Score = 129 bits (142), Expect = 1e-24
Identities = 118/149 (79%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|| ||||| ||||||||||| |||||||| | || || ||||| || |||||||| |||
Sbjct 1903430 CCGTCTTCCAGCTGCTTACCAGCGAAGATTAAGCGCTGCTGGTCAGGGGGAATGCCCTCT 1903489
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||| ||||| || ||||||||| || |||||||| ||| |||||| | |||||||
Sbjct 1903490 TTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTTAAGGGTA 1903549
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
| ||||| || || | ||| || |||||
Sbjct 1903550 ATTGTCTTGCCGGTGAGAGTCTTGACGAA 1903578
>seq2
Length=3541710
Score = 111 bits (122), Expect = 3e-19
Identities = 132/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 194953 TTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATA 195012
|| || || ||||| |||| ||| || | ||||| ||||||||||| || || |||||
Sbjct 89112 TTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATC 89053
Query 195013 AGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCA 195072
| ||| || ||||| || |||||||| || ||||| || || || |||||| || ||
Sbjct 89052 AATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 88993
Query 195073 ATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAA 195131
|| ||||| || || || |||||||| | ||||| || |||| || || |||||
Sbjct 88992 ATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 88934
>seq4
Length=2906552
Score = 86.0 bits (94), Expect = 1e-11
Identities = 181/270 (67%), Gaps = 0/270 (0%)
Strand=Plus/Plus
Query 160599 TCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGGAGCCTTTTCT 160658
|||||| | ||||||| ||||||||| | || || | || ||| |||| || | |
Sbjct 973573 TCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAAAAGAACTTGGACTGGACGCTGATGT 973632
Query 160659 GTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAGACTCTTTATG 160718
| ||||| ||| ||||| |||| ||| ||||| || |||||| || | ||||
Sbjct 973633 GCCCCAACGAATGCCCTGGCCTTGCTGACTGCTATGGCGAGGAATTCGAGGCTTTGTATG 973692
Query 160719 AAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAACTGTGGCATC 160778
| | || || || |||||| | | | | | | ||||| | |||||| ||
Sbjct 973693 AGAAGTATGAGAAGGAGGGACGTGGTCGCACGACCATCCGCGCCCAGAAGCTGTGGTATT 973752
Query 160779 ACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAGGATGCCATCT 160838
|||||| | ||||| ||| |||| ||||| || |||||||||||| |
Sbjct 973753 CCATCCTGGAAGCCCAGACTGAGACTGGTAACCCCTTCATGCTCTACAAGGATGCCTGCA 973812
Query 160839 GTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868
|||||||| |||||||||||| | ||||
Sbjct 973813 ACCGCAAGAGCAACCAGAAGAACCTGGGAA 973842
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480704440321
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |