Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 1e-14 >seq4 Length=2906552 Score = 95.1 bits (104), Expect = 1e-14 Identities = 216/325 (66%), Gaps = 0/325 (0%) Strand=Plus/Minus Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184 ||| ||||| || ||||| | | | | ||||| ||||| || || ||||||| | Sbjct 973682 CTCGAATTCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAGCGT 973623 Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244 ||| ||| | |||| || | |||| || | ||| || ||||| ||||| | || Sbjct 973622 CCAGTCCAAGTTCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAA 973563 Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304 || || | | | | ||||| ||||| ||| | || ||||| || || | Sbjct 973562 CAAGTCACGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAA 973503 Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364 | || || ||||| || || | || || || | |||| || || || ||||| || Sbjct 973502 GACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACC 973443 Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424 ||||| | |||||||||||| ||||| | |||| | ||| || | |||||| || || Sbjct 973442 CTGATCGACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGA 973383 Query 48425 TATACCATTGGTTCCCGAAATATAA 48449 |||| ||||| || | ||| ||| Sbjct 973382 GGTACCGTTGGTGCCAGCAATGTAA 973358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108357339320