Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 95.1 1e-14
>seq4
Length=2906552
Score = 95.1 bits (104), Expect = 1e-14
Identities = 216/325 (66%), Gaps = 0/325 (0%)
Strand=Plus/Minus
Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGA 48184
||| ||||| || ||||| | | | | ||||| ||||| || || ||||||| |
Sbjct 973682 CTCGAATTCCTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAGCGT 973623
Query 48185 CCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAA 48244
||| ||| | |||| || | |||| || | ||| || ||||| ||||| | ||
Sbjct 973622 CCAGTCCAAGTTCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAA 973563
Query 48245 TAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCAT 48304
|| || | | | | ||||| ||||| ||| | || ||||| || || |
Sbjct 973562 CAAGTCACGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAA 973503
Query 48305 TATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCC 48364
| || || ||||| || || | || || || | |||| || || || ||||| ||
Sbjct 973502 GACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACC 973443
Query 48365 TTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGA 48424
||||| | |||||||||||| ||||| | |||| | ||| || | |||||| || ||
Sbjct 973442 CTGATCGACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGA 973383
Query 48425 TATACCATTGGTTCCCGAAATATAA 48449
|||| ||||| || | ||| |||
Sbjct 973382 GGTACCGTTGGTGCCAGCAATGTAA 973358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108357339320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |