Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4 360 4e-94 seq8 190 4e-43 >seq4 Length=2906552 Score = 360 bits (398), Expect = 4e-94 Identities = 1141/1741 (66%), Gaps = 82/1741 (5%) Strand=Plus/Minus Query 212568 GGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTTAGGCC---CTTGCCC 212624 ||| |||| || |||| || || || ||||||||||||||||| || || ||| | Sbjct 974821 GGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCTTGAGACCAAGCTT---C 974765 Query 212625 CAGCC-GTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTCTGGTCATCCTCGTG 212683 ||||| ||| | |||||| |||| | | ||| | ||| ||| ||||| Sbjct 974764 CAGCCAGTGAA-GTGCAT-GCTGGTAAT--CTTGCCC-----ATTGTGGG-ATCCTT--- 974718 Query 212684 GCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCAT 212743 || || | |||||||||||| ||| || ||||| | | | ||||| ||||| Sbjct 974717 ---CATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCAT 974661 Query 212744 GTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTC 212803 | | || | | ||| || | |||||| ||||||||| | | | |||| || || Sbjct 974660 CTGGACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCTTC 974601 Query 212804 TGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCAT 212860 |||| | |||||||||||| | || || | | ||| | | | | ||| Sbjct 974600 GGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTT---CAT 974544 Query 212861 GTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTG 212920 | | ||| ||||||||| || ||||| ||||| || |||||||| | || Sbjct 974543 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACTTG 974484 Query 212921 GAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTC 212980 ||| || || | || || | | |||||| | ||| |||||||||||||||| || ||| Sbjct 974483 GAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTC 974424 Query 212981 GTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTT 213040 |||||| ||||||||||| | || ||||| || ||||| || || | || | ||||| Sbjct 974423 GTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGTT 974364 Query 213041 CCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAG 213100 | | |||||||| ||| | | ||| ||||||| || ||| ||| Sbjct 974363 GCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCG------AGTCCCA-CTCCCA--CAG 974313 Query 213101 GTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCC 213160 ||| | ||| || | ||||||||| || || | |||||| | | | || || Sbjct 974312 GTCAGAGGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCC 974253 Query 213161 CTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGC 213220 || | | || |||||| || | | ||||||| | ||| || |||| ||||| || Sbjct 974252 CTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGC 974193 Query 213221 GTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGG 213280 | ||||||||| ||||| |||| | |||| |||| ||||| || ||| ||||| Sbjct 974192 ATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAGGG 974133 Query 213281 CATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTG 213340 ||| || | |||| | || || || |||||||| || | || ||||||| ||| Sbjct 974132 CATGCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTG 974073 Query 213341 TCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTT 213400 | || ||| ||| | ||||| | ||||| ||| || ||||||||||| Sbjct 974072 GCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGTT 974013 Query 213401 GAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCC 213460 |||||||||| |||| |||||||| | || | || | || | |||| Sbjct 974012 GAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCT------TAAAGTCATAGCA 973959 Query 213461 CCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCAC 213514 || || | ||| | |||| ||||| | ||||| ||||||||| || || Sbjct 973958 GCCTTCGTTGTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAAC 973899 Query 213515 CTC--CTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTG 213572 ||| ||| ||| | |||||| || ||||||||||| |||||| || |||||||| Sbjct 973898 CTCATCTG-GAG-CACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTT 973841 Query 213573 CCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCTTGTAGAGCATGTAGGGGGA 213631 |||||||||| ||||| ||| ||| | |||| |||||||||||||||| ||||| Sbjct 973840 CCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTT 973782 Query 213632 CCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCG 213691 || ||||| ||||| |||| || ||| || | | ||| || | Sbjct 973781 ACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGGGCGCGGATGGTCGT 973722 Query 213692 CCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCA 213751 | || ||| | | ||| |||| || || | | | |||||| | ||| | Sbjct 973721 GCGACCACGTCCCTCCTT---CTCATACTTCTCATACAAAGCCTCGAATTCCTCGCCATA 973665 Query 213752 GACCCTGTCCAGTCCCGGACAGG--ATGCG---GGACACATGAGGCTCCAGTCCCCGTCA 213806 | | ||| || | || |||| || || || ||||| || |||||||| || Sbjct 973664 G---CAGTC-AG-CAAGGCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTCCAAGTTC 973610 Query 213807 TCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTC 213866 | | || | || |||||| || || || | ||| || || ||||| ||| | || Sbjct 973609 TTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCG 973550 Query 213867 CTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGC 213926 | ||| ||| || ||| ||||| ||||| || || ||||||| ||| |||||| Sbjct 973549 CGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGC 973490 Query 213927 CACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGC 213983 || ||||| | ||||||||||||||| || || | |||| || ||||| || || Sbjct 973489 CAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATAT 973430 Query 213984 CTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTT 214043 ||||| ||||||| | || || | ||| | | ||||| || |||||||| Sbjct 973429 CTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTG 973370 Query 214044 CCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGA----GAGCCCTATGCCACC 214099 || || || || ||||||| ||| | || ||| |||| | || || ||||| Sbjct 973369 CCAGCAATGTAAGAGCCGGTGGCAC---GGATGC-GGTGGACGTTCAAGCCAATACCACC 973314 Query 214100 GGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTC 214159 || |||||| |||||||| || | ||| ||| || ||| || | ||||| || Sbjct 973313 AGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATC 973254 Query 214160 ATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTG-GACGAGCCAGAGTTGA 214218 || | | || | ||||||||| || |||| ||||||| | | || | ||||| Sbjct 973253 GTCCTTCATGTCGACCAAGAAGCATGAGGACAGCT-GGGCCTGCGGGGTACCTGCGTTGA 973195 Query 214219 AAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGA 214278 | || |||||| ||||||| | | |||||| | || | ||| |||| |||||||||| Sbjct 973194 ACAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGA 973135 Query 214279 C 214279 | Sbjct 973134 C 973134 >seq8 Length=2103943 Score = 190 bits (210), Expect = 4e-43 Identities = 487/733 (66%), Gaps = 19/733 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || | | || |||||||| Sbjct 374304 CTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTC 374245 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||||||| ||||||||||| | || || | | | || ||| | | |||| Sbjct 374244 CATGAAGTCGAAGGGGTTGGCAGACTTGTAGATCT-TCTCGTTGCCGAGAGCGACAAGCA 374186 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| |||||| |||| ||||| | ||| ||| || ||||||||| | ||||| Sbjct 374185 GACGATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGGAGGG 374126 Query 48018 A-CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 || ||| | ||||| || | ||||| | ||| || | || || || | || Sbjct 374125 CGCAAGGG-AGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATG 374067 Query 48077 TGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT---AG---AGCATG 48130 | | ||| | || || | |||| ||| |||| | || |||| | Sbjct 374066 T------CACGGATCACTTCC--TTGCTGGCGC-GGTTCTTGAGGTGAGAGTGCAGCAGG 374016 Query 48131 CAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGA 48190 ||||||||||| |||||| || ||||| || ||||||| ||||||| ||| ||| Sbjct 374015 CAGGCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGA 373956 Query 48191 CCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAG 48250 |||||||||| || | || ||||||||||| || | || || | || ||||||| Sbjct 373955 CCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAG 373896 Query 48251 ATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAG 48310 || ||||| || || || || || || | || | || |||| ||||||||| | Sbjct 373895 ATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGG 373836 Query 48311 ATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGG 48370 ||||| | |||||||| |||||||| ||||| || || ||||| ||||| | Sbjct 373835 ATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTG 373776 Query 48371 AAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 ||||| | ||| || | ||| | |||||| || ||| | ||| || Sbjct 373775 AAGAGGTAGCTGCGCTGGCTGTTCTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTC 373716 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| | ||||| || ||||||||| ||||||||| | ||||| | | Sbjct 373715 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATC 373656 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || || | ||| | ||| ||||| ||||| || ||||| || || ||| Sbjct 373655 TGGACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCA 373596 Query 48551 AAGAAGGCAAGGA 48563 |||||||| |||| Sbjct 373595 AAGAAGGCCAGGA 373583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532066417920