Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4 260 2e-64 seq8 113 5e-20 >seq4 Length=2906552 Score = 260 bits (288), Expect = 2e-64 Identities = 1060/1642 (65%), Gaps = 55/1642 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| | ||||| || | | |||||| || || |||||||| |||| Sbjct 973077 CCACAGCACATGATTATGCGAGTGTCTGTTGGCATCTGGGGAGATGACATTGAGCGTGTC 973136 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 ||||||||||| || |||||| |||| | | ||| || || | || ||||| | Sbjct 973137 CTGGAGACATACAACCTCATGTCCAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTGT 973194 Query 75330 TCAATGCTGGTACACCA-AGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||| || ||||| || || || ||| ||||| |||||| | ||| || ||||| Sbjct 973195 TCAACGCAGGTACCCCGCAGGCC-CAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGAC 973253 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 || || | |||||||| | ||||| | | ||||| || || ||| |||| Sbjct 973254 GATAGCATTGAGGGTATCTACGACACTCTGAAGACATGTGCCATGATTTCCAAGATGGCT 973313 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || |||||||| || || |||| | | |||| ||| ||| || || Sbjct 973314 GGTGGTATTGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACC 973373 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || ||| || | ||||||||||| |||||||| || || ||| ||| || | ||| Sbjct 973374 AACGGTACCTCTAACGGTATTATTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATAT 973433 Query 75569 GTAAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGG 75622 || |||| ||| || |||| | || || | || ||||| | || || ||| Sbjct 973434 GTCGATCA---GGGTGGTAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGG 973490 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | ||||||||||| | || ||||| || | ||||||| || Sbjct 973491 CACGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGC 973550 Query 75683 TGTAGAGATCTCTTTTCATCC-CTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGA 75741 | || || || | | | || |||||||| || || ||||||||||| ||||| | Sbjct 973551 GCCCGTGA-CTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAAAA 973609 Query 75742 GGG--TGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGAC-GCGG 75797 | ||| | ||| | || | || || || || || || || || | ||| || Sbjct 973610 GAACTTGGAC--TGGACGCTGATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTA 973666 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGA 75857 ||| ||||| || || || | || |||||||| ||||||| | | ||| Sbjct 973667 TGGC-GAGGAATTCGAGGCTTTGTATGAGAAGTATGAGAAGGAGGGACGTGGTCGCACGA 973725 Query 75858 CTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACA 75916 | | | ||| | || | | ||| | | || || || | ||||| |||||||| | Sbjct 973726 CCATCCGCGCC-CAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACTGAGACTGGTAAC 973784 Query 75917 CCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACA 75976 || | ||||| ||||||||||| || ||| ||||| ||||| ||||| ||||||| Sbjct 973785 CCCTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACC 973844 Query 75977 ATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCT 76036 ||| ||||| || || ||||| || ||| | |||||| | | |||||| ||| Sbjct 973845 ATCCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTGTGCTCCAGATGAGGTTGCT 973904 Query 76037 GTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTT 76096 |||||||| ||||| || | ||||| || |||||| || | | || | | Sbjct 973905 GTTTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTATGTCGATTACAACGAAGGCTGCTAT 973964 Query 76097 GATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATT 76156 || | | | || ||||||||| |||| ||| | ||| | || || ||| ||||| Sbjct 973965 GACTTTAAGAAGCTTCATGAAGTCACCAAGGTGGTTGTCCGCAACCTCAACAAGATCATT 974024 Query 76157 GACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATT 76216 || ||| || || || || || || || || ||||| ||| |||| ||| Sbjct 974025 GATGTCAATCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCACCGACCCATT 974084 Query 76217 GGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA-----TTTG 76271 ||| | ||||| || ||||| || || | || | |||| || |||| |||| Sbjct 974085 GGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCT----TGCC-CTGCGCATGCCCTTTG 974139 Query 76272 ATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCC 76331 | || || || || |||| | |||||||| ||||| || || || ||| Sbjct 974140 AGTCTCCCGAGGCTCGTCAGCTGAACAAGCAGATCTTTGAGACCATCTACCATGCGGCCC 974199 Query 76332 TGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTC 76391 | ||||| | || | || | | | ||| |||| || |||| |||| || | Sbjct 974200 TTGAGGCTTCTATGGAGATCGCCAAGGTGGAGGGTCCCTACGAATCATTCAAGGGATCAC 974259 Query 76392 CCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAAC--TA 76449 | || ||| | || | || || || || ||||||| | || || || || | | | Sbjct 974260 CTGCATCCGAGGGCATCCTCCAATTCGACATGTGGG-ATGTCAAGCC-CTCTGACCTGTG 974317 Query 76450 CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGAT 76509 || ||||| |||||||| | ||||||||| | ||| || ||||| | | | Sbjct 974318 GGAGTGGGACTCGCTCAAGGAGCAGATCAAGGAGCACGGTACGCGCAACAGCTTGCTCCT 974377 Query 76510 GGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACC 76569 || || |||||||| ||| || | || || |||| || || || ||||| || || Sbjct 974378 CGCCCCTATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCC 974437 Query 76570 ATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAA 76629 ||||| | |||||||||| | || | ||| || || ||||| |||||||| Sbjct 974438 CTACACTTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAAGTTGTCAACCC 974497 Query 76630 GCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGA---TCT 76686 || |||| ||||| | | || ||||||||| | | |||||| | | | Sbjct 974498 CTGGCTTCTCAAGGACCTGGTCGACACCGGCCTCTGGTCCGATGCCATGAAGAACCGTAT 974557 Query 76687 CA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGA 76745 || || ||| | | || |||||||| || ||| | | ||||| || ||||||||| Sbjct 974558 CATTGCTGAGAAC----GGCTCCATTCAGAACATCCCCAACATCCCCGAAGATATCAAGG 974613 Query 76746 ATCTCTACCGCACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAG 76802 || ||| || || ||||| || || || |||| | ||||| || | Sbjct 974614 CCCTTTACAAGACCGTCTGGGAGATTTCTCAGCGCCAAATTGTC---CAGATGGCAGCTG 974670 Query 76803 ATCGTGGTCGCTTCATTGATCA 76824 |||||||| ||||||||||| Sbjct 974671 ATCGTGGTGCTTTCATTGATCA 974692 >seq8 Length=2103943 Score = 113 bits (124), Expect = 5e-20 Identities = 347/526 (66%), Gaps = 17/526 (3%) Strand=Plus/Plus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || ||||| ||||| ||||||| ||||| |||||||||| | || |||| Sbjct 373495 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 373554 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 || | || ||| | ||||| |||||||||| |||||||| | || ||||| ||| Sbjct 373555 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATT 373614 Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || ||||| | | | ||| | || || || ||||| ||| || || | Sbjct 373615 GTCAACGAGAACCTGGTCGAGCGCTTTAGTGGC-GAGGTCCAGATCCCCGAGGCTCGATG 373673 Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | || | ||| ||| | | | || ||| || || || | | Sbjct 373674 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 373732 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAA-GAAGC-AGTTATTTGAAGCCATCCAAAC 65006 | || | ||||| ||||| || | | | | ||| | | || | ||||| | || Sbjct 373733 TCGATACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 373790 Query 65007 TGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTC 65063 | || || ||| |||||||| | ||||| || || ||| | |||| || || Sbjct 373791 CATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAACTC 373850 Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123 | ||||| ||| ||||||| |||| ||||| || ||||||||||||||| ||| Sbjct 373851 T---TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGG 373907 Query 65124 GTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183 | || | | || | ||| | |||||||| ||||||||||| || || ||| || Sbjct 373908 TGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTC 373967 Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || || || || || || || |||||||| ||| || |||||| Sbjct 373968 CAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCC 374013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569130201440