Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq15 221 2e-52
seq7 181 1e-40
seq4 96.9 5e-15
>seq15
Length=939793
Score = 221 bits (244), Expect = 2e-52
Identities = 466/687 (68%), Gaps = 11/687 (2%)
Strand=Plus/Plus
Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG-TGTAGA 195363
|||||||| | || ||||| ||||| || || ||| | | | | || || ||| ||
Sbjct 711211 GGTATCGACCTGGGTACTACGTACTCCTGCGTCGGTATCTTCCGTGAGGACCGATGT-GA 711269
Query 195364 GATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAA 195423
|| ||| | || ||||| || ||||| || || || |||| ||||||||| || || |
Sbjct 711270 TATCATCGCCAACGACCAGGGTAACCGAACGACCCCTTCGTTCGTTGCCTTCACCGACAC 711329
Query 195424 TGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGT 195483
|| ||| | | || ||||| || || || ||| || |||||||| || || ||
Sbjct 711330 CGAGCGTTTGATCGGTGATGCGGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACCGT 711389
Query 195484 CTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATAT 195543
||| ||||| ||||| | || || ||||||||| | || | ||||| | || ||
Sbjct 711390 CTTCGACGCCAAGCGATTGATCGGACGCAAGTTTGCCGACTCCGAGGTCCAGGCTGACAT 711449
Query 195544 AAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGA 195603
||| ||| | | | ||| | || | |||| ||||| | | | || ||
Sbjct 711450 GAAGCACTTCCCCT-TCAAGATCGTCGACAAG-GGCTCC-AAGCCCGTCGTCGAGGTCGA 711506
Query 195604 ATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663
|| | || |||||||| || | ||||| || || || || ||| | ||| ||
Sbjct 711507 GTTCAAGGGCGAGAAGAAGACCTTCACCCCCGAGGAGATCTCCTCCATGATCCTGACCAA 711566
Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723
|||| ||||| || || || | | | || | || || || | || || | |||||
Sbjct 711567 GATGCGTGAGACCGCCGAGTCCTACCTCGGAACCACCGTCAACAACGCCGTCATCACTGT 711626
Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783
|| || ||||||| || || || ||||| || |||||||| | | ||||| ||
Sbjct 711627 CCCCGCCTACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCCGGTCTCATTGCCGG 711686
Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843
||| ||| || | || ||||| || || || || ||||| || || || || || ||
Sbjct 711687 TCTCAACGTCCTGCGTATCATCAACGAGCCCACCGCTGCTGCCATCGCCTACGGCCTTGA 711746
Query 195844 CAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900
|||||| || ||| | | | || || | ||||| ||||||||||||||||| ||
Sbjct 711747 CAAGAA---GGTCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGGTACCTT 711803
Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960
|||||||| || || | ||||| | ||||| ||||| || ||| | ||||| |||||
Sbjct 711804 CGATGTCTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGTGA 711863
Query 195961 TACTCATCTAGGTGGTGAAGATTTCGA 195987
||||| | |||||||||||||||||
Sbjct 711864 CACTCACTTGGGTGGTGAAGATTTCGA 711890
>seq7
Length=2414983
Score = 181 bits (200), Expect = 1e-40
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || || ||||| || || || || |||||||| ||||| ||||| ||
Sbjct 819680 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 819739
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || |||| ||||||| || || ||||| |||||||| || || |||
Sbjct 819740 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 819799
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| ||| | || || |||||||| ||||| || ||||| || |||||| | || ||||||
Sbjct 819800 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGAACCCTCTCCGACTACAAC 819859
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091
| || ||||||||||| || ||||| || || | || || ||||||||
Sbjct 819860 ATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGGTGC 819909
Score = 168 bits (186), Expect = 9e-37
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || || ||||| || || || || |||||||||||||| ||||| ||
Sbjct 115934 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 115993
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||| || | || ||||||| || || ||||| |||||||| || || |||
Sbjct 115994 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 116053
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || ||||| ||||| || || || || ||||| || || || | || ||||||
Sbjct 116054 CAGCGTCTGATTTTCGCTGGCAAGCAACTCGAGGATGGCCGAACTCTGTCCGACTACAAC 116113
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || |||||||| || || ||||| || || | ||||| ||||||
Sbjct 116114 ATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTTCGTGGTGGT 116161
Score = 95.1 bits (104), Expect = 2e-14
Identities = 117/159 (74%), Gaps = 1/159 (1%)
Strand=Plus/Plus
Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989
||| ||| |||| ||||||| || || ||||| || ||||| || || ||||| || |
Sbjct 116388 CGACAACGTCAAGTCCAAGAT-CAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCTT 116446
Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049
|| ||||||||||| ||||| ||||| || || ||| | || |||||| | || ||
Sbjct 116447 GATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGAGCGACTACAACATCCAGAA 116506
Query 172050 GGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
|||| || || ||| | ||||| | ||||| |||||
Sbjct 116507 GGAGAGCACACTGCACTTGGTTCTGCGTCTTCGTGGTGG 116545
>seq4
Length=2906552
Score = 96.9 bits (106), Expect = 5e-15
Identities = 169/242 (70%), Gaps = 3/242 (1%)
Strand=Plus/Minus
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
||||| || || || |||||||| | | ||||| ||| | ||| || |||| ||
Sbjct 388769 CAACGTCAAGCCACCAAGGACGCCGGTATCATTGCCGGTTTGAACGTCCTCCGAATCGTC 388710
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865
|| || || || || || || ||||| || |||||||| |||| | | ||| | |
Sbjct 388709 AACGAGCCCACCGCCGCCGCTATTGCCTACGGTCTGGATAAGACTGATGGCGA-GCGCCA 388651
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
|| |||| ||| ||||||||||||||||| |||||||| || || || || ||
Sbjct 388650 GATC-ATTG-TCTACGATCTCGGTGGTGGTACTTTTGATGTTTCTCTCCTGTCCATCGAC 388593
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
||| | ||||| || |||||| || ||||| || || || |||||||| || ||
Sbjct 388592 AACGGTGTCTTCGAGGTCTTGGCTACCGCCGGTGACACCCACCTTGGTGGTGAGGACTTT 388533
Query 195986 GA 195987
||
Sbjct 388532 GA 388531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657861881933360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |