Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq15 221 2e-52 seq7 181 1e-40 seq4 96.9 5e-15 >seq15 Length=939793 Score = 221 bits (244), Expect = 2e-52 Identities = 466/687 (68%), Gaps = 11/687 (2%) Strand=Plus/Plus Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG-TGTAGA 195363 |||||||| | || ||||| ||||| || || ||| | | | | || || ||| || Sbjct 711211 GGTATCGACCTGGGTACTACGTACTCCTGCGTCGGTATCTTCCGTGAGGACCGATGT-GA 711269 Query 195364 GATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAA 195423 || ||| | || ||||| || ||||| || || || |||| ||||||||| || || | Sbjct 711270 TATCATCGCCAACGACCAGGGTAACCGAACGACCCCTTCGTTCGTTGCCTTCACCGACAC 711329 Query 195424 TGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGT 195483 || ||| | | || ||||| || || || ||| || |||||||| || || || Sbjct 711330 CGAGCGTTTGATCGGTGATGCGGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACCGT 711389 Query 195484 CTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATAT 195543 ||| ||||| ||||| | || || ||||||||| | || | ||||| | || || Sbjct 711390 CTTCGACGCCAAGCGATTGATCGGACGCAAGTTTGCCGACTCCGAGGTCCAGGCTGACAT 711449 Query 195544 AAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGA 195603 ||| ||| | | | ||| | || | |||| ||||| | | | || || Sbjct 711450 GAAGCACTTCCCCT-TCAAGATCGTCGACAAG-GGCTCC-AAGCCCGTCGTCGAGGTCGA 711506 Query 195604 ATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663 || | || |||||||| || | ||||| || || || || ||| | ||| || Sbjct 711507 GTTCAAGGGCGAGAAGAAGACCTTCACCCCCGAGGAGATCTCCTCCATGATCCTGACCAA 711566 Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723 |||| ||||| || || || | | | || | || || || | || || | ||||| Sbjct 711567 GATGCGTGAGACCGCCGAGTCCTACCTCGGAACCACCGTCAACAACGCCGTCATCACTGT 711626 Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783 || || ||||||| || || || ||||| || |||||||| | | ||||| || Sbjct 711627 CCCCGCCTACTTCAACGACAGCCAGCGTCAGGCTACCAAGGACGCCGGTCTCATTGCCGG 711686 Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843 ||| ||| || | || ||||| || || || || ||||| || || || || || || Sbjct 711687 TCTCAACGTCCTGCGTATCATCAACGAGCCCACCGCTGCTGCCATCGCCTACGGCCTTGA 711746 Query 195844 CAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900 |||||| || ||| | | | || || | ||||| ||||||||||||||||| || Sbjct 711747 CAAGAA---GGTCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGTGGTACCTT 711803 Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960 |||||||| || || | ||||| | ||||| ||||| || ||| | ||||| ||||| Sbjct 711804 CGATGTCTCTCTCCTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCCACTGCCGGTGA 711863 Query 195961 TACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| | ||||||||||||||||| Sbjct 711864 CACTCACTTGGGTGGTGAAGATTTCGA 711890 >seq7 Length=2414983 Score = 181 bits (200), Expect = 1e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| || || || || ||||| || || || || |||||||| ||||| ||||| || Sbjct 819680 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 819739 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || ||||| |||||||| || || ||| Sbjct 819740 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 819799 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || ||| | || || |||||||| ||||| || ||||| || |||||| | || |||||| Sbjct 819800 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGAACCCTCTCCGACTACAAC 819859 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | || ||||||||||| || ||||| || || | || || |||||||| Sbjct 819860 ATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGGTGC 819909 Score = 168 bits (186), Expect = 9e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || ||||| || || || || |||||||||||||| ||||| || Sbjct 115934 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 115993 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || || ||||| || | || ||||||| || || ||||| |||||||| || || ||| Sbjct 115994 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 116053 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || || ||||| ||||| || || || || ||||| || || || | || |||||| Sbjct 116054 CAGCGTCTGATTTTCGCTGGCAAGCAACTCGAGGATGGCCGAACTCTGTCCGACTACAAC 116113 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 | || |||||||| || || ||||| || || | ||||| |||||| Sbjct 116114 ATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTTCGTGGTGGT 116161 Score = 95.1 bits (104), Expect = 2e-14 Identities = 117/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 171930 CGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACT 171989 ||| ||| |||| ||||||| || || ||||| || ||||| || || ||||| || | Sbjct 116388 CGACAACGTCAAGTCCAAGAT-CAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCTT 116446 Query 171990 TATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAA 172049 || ||||||||||| ||||| ||||| || || ||| | || |||||| | || || Sbjct 116447 GATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGAGCGACTACAACATCCAGAA 116506 Query 172050 GGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 |||| || || ||| | ||||| | ||||| ||||| Sbjct 116507 GGAGAGCACACTGCACTTGGTTCTGCGTCTTCGTGGTGG 116545 >seq4 Length=2906552 Score = 96.9 bits (106), Expect = 5e-15 Identities = 169/242 (70%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805 ||||| || || || |||||||| | | ||||| ||| | ||| || |||| || Sbjct 388769 CAACGTCAAGCCACCAAGGACGCCGGTATCATTGCCGGTTTGAACGTCCTCCGAATCGTC 388710 Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865 || || || || || || || ||||| || |||||||| |||| | | ||| | | Sbjct 388709 AACGAGCCCACCGCCGCCGCTATTGCCTACGGTCTGGATAAGACTGATGGCGA-GCGCCA 388651 Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925 || |||| ||| ||||||||||||||||| |||||||| || || || || || Sbjct 388650 GATC-ATTG-TCTACGATCTCGGTGGTGGTACTTTTGATGTTTCTCTCCTGTCCATCGAC 388593 Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985 ||| | ||||| || |||||| || ||||| || || || |||||||| || || Sbjct 388592 AACGGTGTCTTCGAGGTCTTGGCTACCGCCGGTGACACCCACCTTGGTGGTGAGGACTTT 388533 Query 195986 GA 195987 || Sbjct 388532 GA 388531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861881933360