Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq8 143 8e-29
seq3 140 1e-27
seq15 89.7 2e-12
seq25 87.8 5e-12
>seq8
Length=2103943
Score = 143 bits (158), Expect = 8e-29
Identities = 248/355 (70%), Gaps = 4/355 (1%)
Strand=Plus/Plus
Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364
|||| || || ||| || || | ||||| |||||| || ||||| || || |
Sbjct 373661 CCGAGGCTCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCT 373720
Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCA-CAAACTATTCAAC 133423
| || || || ||||| |||||||| || | | |||| ||| | | || ||||||
Sbjct 373721 ACTCCCTGCTCATCGATACCTACATCAAGGAGAACAGCCAGC-GCAGCTACCTCTTCAAC 373779
Query 133424 GCCATTAGCGA-ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCA 133482
|||||| | || ||||||| ||| ||||| | |||||||| || || ||||||||
Sbjct 373780 GCCATT-GAGACCATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCA 373838
Query 133483 GGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttt 133542
||||||| | ||||| || || ||||| ||||| | || ||||| || ||
Sbjct 373839 GGACAAGAACTCTTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTT 373898
Query 133543 tttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACT 133602
||||| ||||| || ||| || || ||||| || ||||| ||| | | ||||| ||
Sbjct 373899 CTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCT 373958
Query 133603 GTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCC 133657
| ||||| ||||| || || || | ||||||| || |||||||| ||||||
Sbjct 373959 GACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCC 374013
>seq3
Length=3158035
Score = 140 bits (154), Expect = 1e-27
Identities = 194/272 (71%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | |||| ||||| | ||||||||||||||| || ||| || || ||
Sbjct 2051571 TCTTCCAGAGCTTTGACCAAACGTCTCTGAATATAACCAGTCTCAGCTGTCTTGACGGCA 2051630
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691
|||||||| ||||| |||||||| |||| || |||||||| | || ||| ||
Sbjct 2051631 GTATCAATGAGACCTTCACGACCAGCCATGGCGTGGAAGAAGAATTCGGAGGGTGTCAGA 2051690
Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751
|| | | | || |||||||||| ||||| |||||||| || | || ||||||
Sbjct 2051691 CCACGGAGGTAAGAATTCTCAACGAAGCCACGAGCCTCGGGTGAGTAATCATCCTTGGTG 2051750
Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811
|| || || || || | || | ||||| |||| ||||||||||| ||||| |||||
Sbjct 2051751 AAATGCGGGAGAGTTCGGTATTTGAAGCCGAATGGAATACGCTTTCCTTCAACAATCTGC 2051810
Query 302812 TGTCCCAGGCACGAAATCATCTGCGAAATATT 302843
||||| | || ||||||| ||||| ||
Sbjct 2051811 TGTCCGACAAGCGCCGTCATCTGAGAAATGTT 2051842
>seq15
Length=939793
Score = 89.7 bits (98), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 1/211 (0%)
Strand=Plus/Minus
Query 251475 GAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGAC 251533
||||| |||| || || | | ||||| ||||||||||||||| || || | ||| ||||
Sbjct 659071 GAAGCTGAGAAGCGCCATAGGCAATCAAACAATCACGCTCCATCTCTCCCAGACGTAGAC 659012
Query 251534 CACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGG 251593
||||||| || | | ||| || | ||| || ||||| | | | ||||||| ||
Sbjct 659011 CACCATCTCGTGATCGACCTTCAGTAGGTTGTCGAGTCAAGATGGCTCTAGGACCACGGG 658952
Query 251594 AGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGA 251653
|| || |||||| | ||||| ||||| |||||||||||| | ||| |||
Sbjct 658951 CACGCGAGTGCATCTTATCCTGCACCATGTGCTTCAGACGCTGGTAGTAGATGGGGCCGT 658892
Query 251654 TGAAGATGCTCGAAGGCATTTGCTCTCCAGT 251684
|||| ||| || | | ||||||||||
Sbjct 658891 TGAAAATGTACGCCTCAAGTGGCTCTCCAGT 658861
>seq25
Length=135202
Score = 87.8 bits (96), Expect = 5e-12
Identities = 111/150 (74%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898
|| ||||| |||||||| ||||| || || || |||||||||||||| || | |
Sbjct 3919 TGAGCGATTGTCATACGGGATGGAATGGCGTGAGGGTTGATGATGATGTCTGGAGTGACA 3978
Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957
|| || ||||||||||| |||| || || ||| | |||||||| ||||||||
Sbjct 3979 CCTTCTCTCGTGAAGGGCATGTCCTCTT-GTCGGTAAGTAACACCAATAGTGCCCTTTTG 4037
Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987
||||||||||| |||||| || |||||
Sbjct 4038 ACCGTGACGAGAGGCGAACTTGTCTCCAAT 4067
Score = 84.2 bits (92), Expect = 6e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|||||||| | ||||||||||||||| |||||||| ||||| || ||||||||||| |
Sbjct 3565 GCACCGTGAGCAATCATACAATCACGTTCCATTTCTCCGAATCGGAGACCACCATCTCTG 3624
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT 251570
|| | |||||| |||| || | |||
Sbjct 3625 GCACGACCCTCCACAGGTTGTCTAGT 3650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816411967231
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |