Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq8 132 6e-25
seq4 113 6e-19
seq6 102 1e-15
>seq8
Length=2103943
Score = 132 bits (146), Expect = 6e-25
Identities = 224/322 (70%), Gaps = 7/322 (2%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| ||| | |||||| |||||| |||||||||||||| |||| || ||
Sbjct 374309 GCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATG 374250
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | ||||||| ||| ||| ||||| | |
Sbjct 374249 TTCTCCATGAAGTCGAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACA 374190
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||| || |||||||| ||||| |||||||| ||| ||| || ||||||||| | |
Sbjct 374189 AGCAGACGATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGG 374130
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | |||| ||| ||||||| ||| || ||| || ||| ||||
Sbjct 374129 AGGGCGCAAGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATG 374070
Query 868931 ATCTGCCTGGGCACGTC---GGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAG 868987
|| | | | ||| || | | | | || |||| | | | || |||||||||
Sbjct 374069 ATGTCACGGATCACTTCCTTGCTGGCGCGGTTCTTGAGGTG---AGAGTGCAGCAGGCAG 374013
Query 868988 GCAAAGTCGCAGTGCA-ACCCT 869008
||||||||| ||||| |||||
Sbjct 374012 GCAAAGTCGGTGTGCAGACCCT 373991
Score = 129 bits (142), Expect = 7e-24
Identities = 228/321 (71%), Gaps = 21/321 (7%)
Strand=Plus/Minus
Query 869150 GCAGGGACGGCAAAGAGGGCACTATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTA 869209
||||| | ||||||| || | ||| ||| ||||| ||| ||| | |||||| |
Sbjct 374020 GCAGGCA-GGCAAAGTCGG---TGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAA 373965
Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGC-C 869268
|||| || || |||||||| || |||||||||||||| ||||||| | | || || |
Sbjct 373964 AAGGTCAGACCAGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAG--GCAAAGGCAC 373907
Query 869269 CG-AGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGA 869327
|| ||| ||||| ||||| |||||||||||| | | || |||| ||||||| | ||
Sbjct 373906 CGCTGAAGAAGATACCCTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAG--GAAGA 373849
Query 869328 GGCCCTCCTTG---TTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCA 869384
| | |||| | ||||||||| || |||||||||||||| || | | | || |
Sbjct 373848 G----TTCTTGTCCTGGATCCACTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAA 373793
Query 869385 CCGTGTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCG-GGTCCTTGACATAGGTGTC 869442
|| || |||||| ||||||| | | | | ||| | ||||||| ||||| ||
Sbjct 373792 TGGTCTCAATGGCGTTGAAGAGGTAGCTGCGCT--GGCTGTTCTCCTTGATGTAGGTATC 373735
Query 869443 GATCAGGAGCGAATAGGTCTC 869463
||| || || || ||||||||
Sbjct 373734 GATGAGCAGGGAGTAGGTCTC 373714
>seq4
Length=2906552
Score = 113 bits (124), Expect = 6e-19
Identities = 215/314 (68%), Gaps = 2/314 (1%)
Strand=Plus/Minus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||| ||||| || | || |||| ||| || || || |||||||| | | ||||| ||
Sbjct 973442 CTGATCGACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGA 973383
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
||||||||||| || | ||| | ||||| ||| || | ||| || |||||
Sbjct 973382 GGTACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCC 973323
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCCCT 1630243
|| || || ||| |||||| || | || || ||| || || ||||||||||| ||||
Sbjct 973322 AATACCACCAGCCATCTTGGAAATCATGGCACA-TGTCTTCAGAGTGTCGTAGATACCCT 973264
Query 1630244 CGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGC 1630303
| || ||| |||||||||| || | ||||| || || || | |||| || |
Sbjct 973263 CAATGCTATCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTAC 973204
Query 1630304 CGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGG 1630363
| |||||||| || ||||| | || |||||| |||| | |||||| || ||| |
Sbjct 973203 CTGCGTTGAACAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTATG 973144
Query 1630364 TGGCGAGCACGCGC 1630377
| | || || |||
Sbjct 973143 TCTCCAGGACACGC 973130
Score = 113 bits (124), Expect = 6e-19
Identities = 94/115 (82%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592180 ATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTG 1592239
|||| ||| | |||| ||| ||||| ||||| || | ||| |||| || ||| |||||
Sbjct 1115191 ATCCAGGCCTCAAACTTCCTTGACATTAAGCCACTCTTGGATGTTGGCTGTAAGACTGTG 1115132
Query 1592240 GCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
|| |||||||||||||||||||| ||||| ||||| |||||||| || |||||||
Sbjct 1115131 GCAAACATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACATTCAACATCA 1115077
>seq6
Length=2428900
Score = 102 bits (112), Expect = 1e-15
Identities = 101/131 (77%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 18358 CCGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCG 18417
||||| ||||| |||||||||| || ||| | | ||||| || |||||||| || ||
Sbjct 2339400 CCGCGCCCCTCCCACGCCGACTGGACTTACCTTGAGAAGTATGGTATCAAGGCCTCCTCT 2339341
Query 18418 GGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCC 18477
||||| ||||| |||||||||||| | ||||||||||||||||| || |||
Sbjct 2339340 GGCGGCGGCCGAAGCAGCGCCCGCGAGACCATTGCCCGCGTCGCCGCCGGCGCTGTTGCC 2339281
Query 18478 GAGAAATGGCT 18488
||||| |||||
Sbjct 2339280 GAGAAGTGGCT 2339270
Score = 86.0 bits (94), Expect = 8e-11
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154
|||||||||||||| |||||||||||| | ||||| ||||||||||| || ||||
Sbjct 2338977 GGCCTCGGCGAGCCATGCTTTGACAAGCTTGAGGCTCTTCTCGCCCACGCTATCATGTCT 2338918
Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGC 19184
|| || || || ||||| || |||||||||
Sbjct 2338917 ATTCCTGCTACTAAGGGCTTTGAGATTGGC 2338888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107134029924971
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |