Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq8 167 4e-35 seq4 100 5e-15 seq7 98.7 2e-14 >seq8 Length=2103943 Score = 167 bits (184), Expect = 4e-35 Identities = 240/335 (72%), Gaps = 19/335 (6%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| ||| ||| | |||||| |||| || || |||||||| || ||||| Sbjct 373995 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGGCATGAGACCTCGCTT 373936 Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456 ||||||||| ||||||| || || || || ||| ||||| ||||| |||||||| Sbjct 373935 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCAACGGCGGC 373879 Query 794457 AAAGCCGACGAGCCGCTCGGCAAA---AGTGTCCAGGCCCTCTTTGTTGATCCACTTCAT 794513 |||| | || || |||| |||||| || || | | ||| ||||||||| || Sbjct 373878 AAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTG------GATCCACTTGAT 373825 Query 794514 CGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC 794573 ||||| || ||||| || | | | || | || || |||||| ||||||| | Sbjct 373824 GGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAG-- 373767 Query 794574 CTTCTCGACCGGGTC--CTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGG 794631 || | | | | || ||||| |||||| |||||||| || ||||||||||| |||||| Sbjct 373766 CTGCGCTGGCTGTTCTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTCGGAGTGG 373707 Query 794632 ATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 ||||| || || |||||||||||| || ||||| Sbjct 373706 ATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 373672 Score = 141 bits (156), Expect = 1e-27 Identities = 232/329 (71%), Gaps = 8/329 (2%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || ||| | |||||| |||||| |||||||||||||| ||| Sbjct 374317 TGACACCAGCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGA 374258 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | || || |||||| | ||| |||||||| | | |||| ||||||| |||| Sbjct 374257 GAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGA 374198 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | ||||||| || ||||||||||| ||||||||||| ||| ||| || ||||| Sbjct 374197 GAGCGACAAGCAGACGATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCA 374138 Query 794071 TGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129 |||| | ||| || || ||| || | |||| | | ||||||| ||| || ||| || Sbjct 374137 TGCCAAGGAGGGCGCAAGGG-AGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCA 374079 Query 794130 TCGATGATGATCTGCCTGGGCACGTC--GGACGACG-GCTTGTCGACGAGCATCGTGTAG 794186 ||| ||||||| | | | ||| || | | || | || | || | | | || Sbjct 374078 TCGGTGATGATGTCACGGATCACTTCCTTGCTGGCGCGGTTCTTGAGGTG---AGAGTGC 374022 Query 794187 AGCAGGCAGGCAAAGTCGCAATGCAGACC 794215 |||||||||||||||||| |||||||| Sbjct 374021 AGCAGGCAGGCAAAGTCGGTGTGCAGACC 373993 >seq4 Length=2906552 Score = 100 bits (110), Expect = 5e-15 Identities = 177/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| |||||||| | || |||| ||| || || || |||||||| | || ||||| || Sbjct 973442 CTGATCGACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGA 973383 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||||| || | ||| | ||| | ||| || | ||| || ||||| Sbjct 973382 GGTACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCC 973323 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 || || || ||| |||||| || | || || | ||||| || |||||||| ||||| Sbjct 973322 AATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTC 973263 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 || ||| |||||||||| | || ||||| || || || | ||| || || Sbjct 973262 AATGCTATCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACC 973203 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 || ||||| || ||||| Sbjct 973202 TGCGTTGAACAGGGTGGG 973185 Score = 100 bits (110), Expect = 5e-15 Identities = 91/115 (79%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 2035641 ATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700 |||| ||| | |||| ||| ||||| ||||| ||| | ||| | || || ||||| ||| Sbjct 1115191 ATCCAGGCCTCAAACTTCCTTGACATTAAGCCACTCTTGGATGTTGGCTGTAAGACTGTG 1115132 Query 2035701 GCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755 || ||| | |||||||||||||| ||||| || || |||||||| || ||||||| Sbjct 1115131 GCAAACATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACATTCAACATCA 1115077 Score = 87.8 bits (96), Expect = 3e-11 Identities = 139/195 (71%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGC-GGTTGAGGCGACGCGCGCCGGCGCTCTC 2070110 |||||||||||||| ||||||||||| ||| ||| || |||| || ||| ||| Sbjct 974197 GCCGCATGGTAGATGGTCTCAAAGAT-CTGCTTGTTCAGCTGACGAGCCTCGGGAGACTC 974139 Query 2070111 CCACGGCAGGTCCA--TCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATC 2070168 | |||| | || || || || |||||||| || ||||| || || || || || Sbjct 974138 AAAGGGCATGCGCAGGGCAAGG--AAAGCGTCGGCAAGACCCTGGACACCAACACCAATG 974081 Query 2070169 GGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATC 2070228 || |||||||||| ||| || |||||||| | || |||||||| |||| || || Sbjct 974080 GGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATG 974021 Query 2070229 ACGCGGTTGAGGTTG 2070243 | |||||||||| Sbjct 974020 ATCTTGTTGAGGTTG 974006 >seq7 Length=2414983 Score = 98.7 bits (108), Expect = 2e-14 Identities = 77/92 (84%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||||||||||||||| ||||| |||||||||||| |||||| ||| || ||| Sbjct 2369114 GTACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAATTCACCCGGCAG 2369055 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562 ||||| || || | ||||||||||| |||| Sbjct 2369054 GATCAATCGGACAGATGTCTGGATCTCTCGGG 2369023 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916239698402657