Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq8 167 4e-35
seq4 100 5e-15
seq7 98.7 2e-14
>seq8
Length=2103943
Score = 167 bits (184), Expect = 4e-35
Identities = 240/335 (72%), Gaps = 19/335 (6%)
Strand=Plus/Minus
Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399
||| ||||| ||| ||| | |||||| |||| || || |||||||| || |||||
Sbjct 373995 ACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGGCATGAGACCTCGCTT 373936
Query 794400 CTTGAGCCAAAAGATGG---CACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGC 794456
||||||||| ||||||| || || || || ||| ||||| ||||| ||||||||
Sbjct 373935 CTTGAGCCAGAAGATGGAGGCAAAGGCACCGCT---GAAGAAGATACCCTCAACGGCGGC 373879
Query 794457 AAAGCCGACGAGCCGCTCGGCAAA---AGTGTCCAGGCCCTCTTTGTTGATCCACTTCAT 794513
|||| | || || |||| |||||| || || | | ||| ||||||||| ||
Sbjct 373878 AAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTG------GATCCACTTGAT 373825
Query 794514 CGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC 794573
||||| || ||||| || | | | || | || || |||||| ||||||| |
Sbjct 373824 GGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAG-- 373767
Query 794574 CTTCTCGACCGGGTC--CTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGG 794631
|| | | | | || ||||| |||||| |||||||| || ||||||||||| ||||||
Sbjct 373766 CTGCGCTGGCTGTTCTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTCGGAGTGG 373707
Query 794632 ATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
||||| || || |||||||||||| || |||||
Sbjct 373706 ATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCA 373672
Score = 141 bits (156), Expect = 1e-27
Identities = 232/329 (71%), Gaps = 8/329 (2%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || ||| | |||||| |||||| |||||||||||||| |||
Sbjct 374317 TGACACCAGCCTTCTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGA 374258
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
| || || |||||| | ||| |||||||| | | |||| ||||||| ||||
Sbjct 374257 GAGAAATGTTCTCCATGAAGTCGAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGA 374198
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | ||||||| || ||||||||||| ||||||||||| ||| ||| || |||||
Sbjct 374197 GAGCGACAAGCAGACGATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCA 374138
Query 794071 TGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||| | ||| || || ||| || | |||| | | ||||||| ||| || ||| ||
Sbjct 374137 TGCCAAGGAGGGCGCAAGGG-AGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCA 374079
Query 794130 TCGATGATGATCTGCCTGGGCACGTC--GGACGACG-GCTTGTCGACGAGCATCGTGTAG 794186
||| ||||||| | | | ||| || | | || | || | || | | | ||
Sbjct 374078 TCGGTGATGATGTCACGGATCACTTCCTTGCTGGCGCGGTTCTTGAGGTG---AGAGTGC 374022
Query 794187 AGCAGGCAGGCAAAGTCGCAATGCAGACC 794215
|||||||||||||||||| ||||||||
Sbjct 374021 AGCAGGCAGGCAAAGTCGGTGTGCAGACC 373993
>seq4
Length=2906552
Score = 100 bits (110), Expect = 5e-15
Identities = 177/258 (69%), Gaps = 0/258 (0%)
Strand=Plus/Minus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
||| |||||||| | || |||| ||| || || || |||||||| | || ||||| ||
Sbjct 973442 CTGATCGACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGA 973383
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
||||||||||| || | ||| | ||| | ||| || | ||| || |||||
Sbjct 973382 GGTACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCC 973323
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| || || ||| |||||| || | || || | ||||| || |||||||| |||||
Sbjct 973322 AATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTC 973263
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
|| ||| |||||||||| | || ||||| || || || | ||| || ||
Sbjct 973262 AATGCTATCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTGGGCCTGCGGGGTACC 973203
Query 2073780 GGCATTGAAGAGCGTGGG 2073797
|| ||||| || |||||
Sbjct 973202 TGCGTTGAACAGGGTGGG 973185
Score = 100 bits (110), Expect = 5e-15
Identities = 91/115 (79%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035641 ATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTG 2035700
|||| ||| | |||| ||| ||||| ||||| ||| | ||| | || || ||||| |||
Sbjct 1115191 ATCCAGGCCTCAAACTTCCTTGACATTAAGCCACTCTTGGATGTTGGCTGTAAGACTGTG 1115132
Query 2035701 GCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCA 2035755
|| ||| | |||||||||||||| ||||| || || |||||||| || |||||||
Sbjct 1115131 GCAAACATGATCAAGGGCAAGTCCCCCGAAGAGATTCGCAAGACATTCAACATCA 1115077
Score = 87.8 bits (96), Expect = 3e-11
Identities = 139/195 (71%), Gaps = 6/195 (3%)
Strand=Plus/Minus
Query 2070052 GCCGCATGGTAGATCGTCTCAAAGATGGTGC-GGTTGAGGCGACGCGCGCCGGCGCTCTC 2070110
|||||||||||||| ||||||||||| ||| ||| || |||| || ||| |||
Sbjct 974197 GCCGCATGGTAGATGGTCTCAAAGAT-CTGCTTGTTCAGCTGACGAGCCTCGGGAGACTC 974139
Query 2070111 CCACGGCAGGTCCA--TCATGGCAAACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATC 2070168
| |||| | || || || || |||||||| || ||||| || || || || ||
Sbjct 974138 AAAGGGCATGCGCAGGGCAAGG--AAAGCGTCGGCAAGACCCTGGACACCAACACCAATG 974081
Query 2070169 GGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATC 2070228
|| |||||||||| ||| || |||||||| | || |||||||| |||| || ||
Sbjct 974080 GGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATG 974021
Query 2070229 ACGCGGTTGAGGTTG 2070243
| ||||||||||
Sbjct 974020 ATCTTGTTGAGGTTG 974006
>seq7
Length=2414983
Score = 98.7 bits (108), Expect = 2e-14
Identities = 77/92 (84%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530
||||||||||||||||||||| ||||| |||||||||||| |||||| ||| || |||
Sbjct 2369114 GTACTTGGTGACGGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAATTCACCCGGCAG 2369055
Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGG 1485562
||||| || || | ||||||||||| ||||
Sbjct 2369054 GATCAATCGGACAGATGTCTGGATCTCTCGGG 2369023
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916239698402657
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |