Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3 105 8e-18 >seq3 Length=3158035 Score = 105 bits (116), Expect = 8e-18 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990 ||||| || ||||||||| ||||| |||| | ||| | | || ||| ||| | Sbjct 1641398 GTGGTCGATGTAGACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGGTC 1641457 Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 | |||||| || | ||||| |||||||||| |||||||| ||||||||||||| || Sbjct 1641458 GCACACGTGAGCGAGCATGTGTGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCC 1641517 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || |||||||| | |||| |||||| |||||||| Sbjct 1641518 GAGACCCATGTCGCAGGACCGCTGGTATAGCTGGCA 1641553 Score = 102 bits (112), Expect = 1e-16 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 |||||||| ||||||| ||| | |||| | | |||||||||| ||| |||||| Sbjct 1641756 AGCTGGTCGACGCCCTTGCCGGCATAGTCCGCCTTTGCGTCCACGTACTCGGCGCCAAAG 1641815 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351 |||| |||||| |||||||| || || |||||||| ||| || | ||| | | ||| Sbjct 1641816 TGCCGCCACTGAAAGCCGTAGACGGGGCCCAGGTCACCGACCTCGCGGTGGGTCAGGCCG 1641875 Query 147352 GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAG 147411 | | | ||| |||||| |||| || | | |||||||||| || || | || | Sbjct 1641876 ACGCTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGACGCCGACGTCGTTG 1641935 Query 147412 AGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 || | ||| |||| |||| |||||||||||| ||||| Sbjct 1641936 AGGGCGAGGGAGGACGTGTTGCCCTCGATGAACCAGAGGAGCTC 1641979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487540503200