Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq3 105 8e-18
>seq3
Length=3158035
Score = 105 bits (116), Expect = 8e-18
Identities = 117/156 (75%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990
||||| || ||||||||| ||||| |||| | ||| | | || ||| ||| |
Sbjct 1641398 GTGGTCGATGTAGACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGGTC 1641457
Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050
| |||||| || | ||||| |||||||||| |||||||| ||||||||||||| ||
Sbjct 1641458 GCACACGTGAGCGAGCATGTGTGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCC 1641517
Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086
|| |||||||| | |||| |||||| ||||||||
Sbjct 1641518 GAGACCCATGTCGCAGGACCGCTGGTATAGCTGGCA 1641553
Score = 102 bits (112), Expect = 1e-16
Identities = 157/224 (70%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291
|||||||| ||||||| ||| | |||| | | |||||||||| ||| ||||||
Sbjct 1641756 AGCTGGTCGACGCCCTTGCCGGCATAGTCCGCCTTTGCGTCCACGTACTCGGCGCCAAAG 1641815
Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCC 147351
|||| |||||| |||||||| || || |||||||| ||| || | ||| | | |||
Sbjct 1641816 TGCCGCCACTGAAAGCCGTAGACGGGGCCCAGGTCACCGACCTCGCGGTGGGTCAGGCCG 1641875
Query 147352 GCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAG 147411
| | | ||| |||||| |||| || | | |||||||||| || || | || |
Sbjct 1641876 ACGCTGTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGACGCCGACGTCGTTG 1641935
Query 147412 AGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455
|| | ||| |||| |||| |||||||||||| |||||
Sbjct 1641936 AGGGCGAGGGAGGACGTGTTGCCCTCGATGAACCAGAGGAGCTC 1641979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487540503200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |