Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq8 239 6e-57
seq4 111 2e-18
>seq8
Length=2103943
Score = 239 bits (264), Expect = 6e-57
Identities = 390/546 (71%), Gaps = 23/546 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || |||||||||||||| || ||||||||||| ||| | || |
Sbjct 373458 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAAGAGATTGATC 373516
Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891
| | || | | ||||| ||| ||| ||| |||||| | ||||||
Sbjct 373517 TGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTACTTCATCT 373576
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| |||| ||||| ||| |||||| |||||||| || ||||||||||| ||
Sbjct 373577 CTCACATCCTGGCCTTCTTT-GCCGCCTCTGATGGCATTGTCAACGAGAACCTGGTCGAG 373635
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||||| |||||||| | || ||||| || | || ||||| |||||||||
Sbjct 373636 CGCTTTAGTGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTACGGCTTCCAGATCATG 373695
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAG--GACC 1456069
|| || ||||||||||| || |||||||| || || ||||| |||||| ||||| || |
Sbjct 373696 ATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGATACCTACATCAAGGAGAAC 373755
Query 1456070 CGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129
| | | || | ||||||| |||||| || || | || | | | || ||||
Sbjct 373756 AGCCAGCGCAG--CTACCTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGAAGG 373813
Query 1456130 CCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186
|||||||||| || ||||||||| ||||| | ||| | ||||||| |||| ||
Sbjct 373814 CCGACTGGGCCATCAAGTGGATCCAGGACAAGAA----CTCTTC-CTTTGCCCAGCGCCT 373868
Query 1456187 CGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATCTTT 1456243
|| | |||||||| ||| ||||| ||||| ||| ||| || || | | |||||||
Sbjct 373869 GGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGC--CTCCATCTTC 373926
Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCG 1456303
|||||||||||||| || |||||||| |||| | |||| |||||| | ||| |||
Sbjct 373927 TGGCTCAAGAAGCGAGGTCTCATGCCTGGTC-TGACCTTTTCCAACGAGCTCATCTCTCG 373985
Query 1456304 CGACGA 1456309
|||||
Sbjct 373986 TGACGA 373991
Score = 113 bits (124), Expect = 6e-19
Identities = 180/253 (71%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| ||| || ||| || ||| ||||||| | | |||| | || || ||
Sbjct 374068 ATCATCACCGATGCTGTCCGAATTGAGCAAGAGTTCTTGACCGAGGCTCTCCCTTGCGCC 374127
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
||| | ||||||||| ||| | || ||| ||||||||||| || |||||||| || |
Sbjct 374128 CTCCTTGGCATGAACTCCAAC-CTGATGAAGCAGTACATTGAGTTC-GTCGCCGATCGTC 374185
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
|||| | || |||||| || ||||| |||| | | |||||||| ||| | |||
Sbjct 374186 TGCTTGTCGCTCTCGGCAACG-AGAAGATCTACAAGTCTGCCAACCCCTTCGACTTCATG 374244
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761
||| || || |||| |||||||||||||| |||||| ||||| | ||| |||
Sbjct 374245 GAGAACATTTCTCTCGGTGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAG 374304
Query 1456762 AAGGCCGGCGTCA 1456774
||||| || ||||
Sbjct 374305 AAGGCTGGTGTCA 374317
>seq4
Length=2906552
Score = 111 bits (122), Expect = 2e-18
Identities = 200/290 (69%), Gaps = 2/290 (1%)
Strand=Plus/Plus
Query 259894 CATGTCGCAGCA-GTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952
|||||| ||||| ||| |||||| || | ||||| || || || || || || ||||
Sbjct 973154 CATGTC-CAGCAAGTTCTTCACCCATGCCTCCCCCACCCTGTTCAACGCAGGTACCCCGC 973212
Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012
| ||| || || ||||| || | |||||||||| |||| || ||||| ||||
Sbjct 973213 AGGCCCAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGACGATAGCATTGAGGGTATCT 973272
Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072
| ||||| || ||| || || | || |||||| ||| || || || || || ||
Sbjct 973273 ACGACACTCTGAAGACATGTGCCATGATTTCCAAGATGGCTGGTGGTATTGGCTTGAACG 973332
Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132
||| | || ||| | ||| | ||| | || ||||||||||| || |||||
Sbjct 973333 TCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACCAACGGTACCTCTAACGGTA 973392
Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|| | ||||||||||| || || ||| |||| || | || ||||| |||
Sbjct 973393 TTATTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATATGTCGATCAG 973442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177805123534206
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |