Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3 125 7e-24 seq7 116 4e-21 seq2 104 2e-17 >seq3 Length=3158035 Score = 125 bits (138), Expect = 7e-24 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 134525 CTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAAT 134584 ||| || ||||||||||||| | ||||||| ||| || ||||| || || || || || Sbjct 1903399 CTTCTGGATGTTGTAGTCGCTCAAGGTGTGACCGTCTTCCAGCTGCTTACCAGCGAAGAT 1903458 Query 134585 CAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTC 134644 || |||||||| || || || ||||| ||||| || ||||| || ||||| ||| Sbjct 1903459 TAAGCGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGAATCTTGGACTTGACGTTGTC 1903518 Query 134645 CAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAA 134704 | |||||||| |||||||| | || ||||| || || ||||| | ||| || ||||| Sbjct 1903519 GATGGTGTCGGAAGATTCCACCTTAAGGGTAATTGTCTTGCCGGTGAGAGTCTTGACGAA 1903578 Query 134705 AATTTGCAT 134713 ||| || || Sbjct 1903579 AATCTGTAT 1903587 >seq7 Length=2414983 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| ||||| || |||||||||||| | || | || ||| Sbjct 116142 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGGCCATCCTCG 116083 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 || || ||||| || ||||||| ||||||||| || || || ||||| || || || || Sbjct 116082 AGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 116023 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | || ||||| || ||||| ||||| || ||||| || Sbjct 116022 ATCTTGGACTTCACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCTTG 115963 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | || || ||||| |||||||| Sbjct 115962 CCGGTGAGGGTCTTGACGAAGATTTGCAT 115934 Score = 107 bits (118), Expect = 2e-18 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| || ||||| || || || ||||| || |||||||||||| | ||| | Sbjct 819897 AGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGG 819838 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||| || || || || ||||| |||||||| || || || ||||| || Sbjct 819837 CCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCC 819778 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || || || ||||| ||| | |||||||| || ||||| || || || Sbjct 819777 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTG 819718 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || || | || || |||||||| ||||| ||| Sbjct 819717 ATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 819676 >seq2 Length=3541710 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583 |||| || |||||||||||| || |||| | || |||||||| ||||| ||||| | Sbjct 89114 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 89055 Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643 |||| |||||||| || || || ||||| || || || || || || ||||| || Sbjct 89054 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 88995 Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 | | |||||||| || || || || || || ||||| || || || | || || |||| Sbjct 88994 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 88935 Query 134704 AA 134705 || Sbjct 88934 AA 88933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398001998760