Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 141 1e-28
>seq4
Length=2906552
Score = 141 bits (156), Expect = 1e-28
Identities = 407/614 (66%), Gaps = 18/614 (3%)
Strand=Plus/Minus
Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410
||| || ||||| || | ||| || ||||| ||| ||||| |||||||| || || ||
Sbjct 973847 GATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 973788
Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470
|| ||||||| ||| |||| | ||| | || || | ||| | | || ||
Sbjct 973787 GGGGTTACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGGGCGCGGAT 973728
Query 69471 TACGGTCTTGTAACG-CTTCTCT--TTTTCATA-TTGTG-TATATAGCCGTTCGAATTCA 69525
|||| || || | || || || ||||| || | || | |||| ||||||||
Sbjct 973727 ---GGTCGTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCC--TCGAATTC- 973674
Query 69526 TCTCCCCAAA-CA-TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583
||| ||| | || ||| | | ||||| ||||| || || ||||||| | ||| |
Sbjct 973673 -CTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTC-- 973617
Query 69584 CATCATCCTT--AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATC 69641
|| || || ||| || ||||| || |||||||||||||| ||||| | || | ||
Sbjct 973616 CAAGTTCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTC 973557
Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701
| || | ||||| || || || || ||||| || ||||| | | ||
Sbjct 973556 ACGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTC 973497
Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761
| ||||| || || || || || || | | | || || || || || || ||||||||
Sbjct 973496 GGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATC 973437
Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821
| |||||||||||||| || | |||| ||||| ||||||||||| ||||| ||||
Sbjct 973436 GACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACC 973377
Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCC 69881
|| || |||| ||| ||| || | || || || | | || || ||
Sbjct 973376 GTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACC 973317
Query 69882 TCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCT 69941
|| ||||| || || || | ||||| |||| ||||| || |||||||| |||||
Sbjct 973316 ACCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCT 973257
Query 69942 ATCATCTATCATGT 69955
||| || ||||||
Sbjct 973256 ATCGTCCTTCATGT 973243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686908259059320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |