Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq4 141 1e-28 >seq4 Length=2906552 Score = 141 bits (156), Expect = 1e-28 Identities = 407/614 (66%), Gaps = 18/614 (3%) Strand=Plus/Minus Query 69351 GATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAA 69410 ||| || ||||| || | ||| || ||||| ||| ||||| |||||||| || || || Sbjct 973847 GATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAA 973788 Query 69411 CGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTAT 69470 || ||||||| ||| |||| | ||| | || || | ||| | | || || Sbjct 973787 GGGGTTACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGGGCGCGGAT 973728 Query 69471 TACGGTCTTGTAACG-CTTCTCT--TTTTCATA-TTGTG-TATATAGCCGTTCGAATTCA 69525 |||| || || | || || || ||||| || | || | |||| |||||||| Sbjct 973727 ---GGTCGTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCC--TCGAATTC- 973674 Query 69526 TCTCCCCAAA-CA-TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACAT 69583 ||| ||| | || ||| | | ||||| ||||| || || ||||||| | ||| | Sbjct 973673 -CTCGCCATAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTC-- 973617 Query 69584 CATCATCCTT--AACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATC 69641 || || || ||| || ||||| || |||||||||||||| ||||| | || | || Sbjct 973616 CAAGTTCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTC 973557 Query 69642 TCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATC 69701 | || | ||||| || || || || ||||| || ||||| | | || Sbjct 973556 ACGGGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTC 973497 Query 69702 AGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATC 69761 | ||||| || || || || || || | | | || || || || || || |||||||| Sbjct 973496 GGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATC 973437 Query 69762 TATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACC 69821 | |||||||||||||| || | |||| ||||| ||||||||||| ||||| |||| Sbjct 973436 GACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACC 973377 Query 69822 ATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCC 69881 || || |||| ||| ||| || | || || || | | || || || Sbjct 973376 GTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACC 973317 Query 69882 TCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCT 69941 || ||||| || || || | ||||| |||| ||||| || |||||||| ||||| Sbjct 973316 ACCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCT 973257 Query 69942 ATCATCTATCATGT 69955 ||| || |||||| Sbjct 973256 ATCGTCCTTCATGT 973243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908259059320