Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq8 118 3e-21 >seq8 Length=2103943 Score = 118 bits (130), Expect = 3e-21 Identities = 363/543 (67%), Gaps = 25/543 (5%) Strand=Plus/Plus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| || ||||||||||| |||||||| || ||| |||||| | || || Sbjct 373492 TTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTG 373551 Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452 | | |||| || || | ||||| | |||| ||||||||||||| | || Sbjct 373552 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGA 373607 Query 443453 CGGTATCGTCGGTGAGAATCTGGT-GA-CGCGTTTCTA-CGAAATGGTAGTGTACACCGA 443509 || || ||| ||||| ||||| || ||| || | ||| ||| | | |||| Sbjct 373608 TGGCATTGTCAACGAGAACCTGGTCGAGCGCTTTAGTGGCGA---GGTCCAGATCCCCGA 373664 Query 443510 GGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAG 443569 ||| || | |||||||| ||||| | ||||||||||| ||| ||||| |||| Sbjct 373665 GGCTCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTC 373724 Query 443570 TCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGT 443628 | | | ||| | || ||| || || || || ||||| | | ||| || || Sbjct 373725 CCTGCTCATCGATAC-CTACATC--AAGGAGAACAGCCAGCGCAGCTACCTCTTCAACGC 373781 Query 443629 TCAT---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAAC 443685 ||| ||||| || |||| | ||| | |||||| | ||||| || | Sbjct 373782 -CATTGAGACCATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAG- 373839 Query 443686 GAGAAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTG 443744 || || | ||| | || | | |||| || || || ||||| | || || || | || Sbjct 373840 GACAAGAACTCTTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTC 373899 Query 443745 TTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCT 443804 || ||||| |||| ||||||||||||||| | || ||||| || || |||| ||||| Sbjct 373900 TTCAGCGGTGCCTTT-GCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCT 373958 Query 443805 GACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||||||| ||||| || ||| ||| ||||||||| |||| |||||| ||||| || Sbjct 373959 GACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCT 374018 Query 443865 TCT 443867 || Sbjct 374019 GCT 374021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588334717915035