Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq8 118 3e-21
>seq8
Length=2103943
Score = 118 bits (130), Expect = 3e-21
Identities = 363/543 (67%), Gaps = 25/543 (5%)
Strand=Plus/Plus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| || ||||||||||| |||||||| || ||| |||||| | || ||
Sbjct 373492 TTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTG 373551
Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452
| | |||| || || | ||||| | |||| ||||||||||||| | ||
Sbjct 373552 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGA 373607
Query 443453 CGGTATCGTCGGTGAGAATCTGGT-GA-CGCGTTTCTA-CGAAATGGTAGTGTACACCGA 443509
|| || ||| ||||| ||||| || ||| || | ||| ||| | | ||||
Sbjct 373608 TGGCATTGTCAACGAGAACCTGGTCGAGCGCTTTAGTGGCGA---GGTCCAGATCCCCGA 373664
Query 443510 GGCCCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAG 443569
||| || | |||||||| ||||| | ||||||||||| ||| ||||| ||||
Sbjct 373665 GGCTCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTC 373724
Query 443570 TCAGTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGT 443628
| | | ||| | || ||| || || || || ||||| | | ||| || ||
Sbjct 373725 CCTGCTCATCGATAC-CTACATC--AAGGAGAACAGCCAGCGCAGCTACCTCTTCAACGC 373781
Query 443629 TCAT---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAAC 443685
||| ||||| || |||| | ||| | |||||| | ||||| || |
Sbjct 373782 -CATTGAGACCATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAG- 373839
Query 443686 GAGAAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTG 443744
|| || | ||| | || | | |||| || || || ||||| | || || || | ||
Sbjct 373840 GACAAGAACTCTTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTC 373899
Query 443745 TTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCT 443804
|| ||||| |||| ||||||||||||||| | || ||||| || || |||| |||||
Sbjct 373900 TTCAGCGGTGCCTTT-GCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCT 373958
Query 443805 GACCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCT 443864
||||||| ||||| || ||| ||| ||||||||| |||| |||||| ||||| ||
Sbjct 373959 GACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGCCTGCCT 374018
Query 443865 TCT 443867
||
Sbjct 374019 GCT 374021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588334717915035
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |