Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq4 260 2e-64 seq8 118 1e-21 >seq4 Length=2906552 Score = 260 bits (288), Expect = 2e-64 Identities = 1014/1563 (65%), Gaps = 57/1563 (4%) Strand=Plus/Minus Query 110551 CTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCA-TGA 110609 ||||||||| || ||||| | | ||| ||||| ||||| || | ||| || ||| Sbjct 974612 CTTGATATCTTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTC----TCAGCAATGA 974557 Query 110610 GA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCT 110666 | | |||||| | | ||||||||| || | | ||||| |||| || Sbjct 974556 TACGGTTCTTCATGGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGG 974497 Query 110667 TGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATG 110726 |||||||| ||||| || || ||| | || | |||||||||| | ||||| | Sbjct 974496 GGTTGACAACTTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGG 974437 Query 110727 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 110786 | || ||||| || || || |||| || || | || ||| |||||||| || || | Sbjct 974436 GCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGA 974377 Query 110787 TCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGT 110846 | | ||||| || ||| | ||||||||| | |||||||| ||||| || Sbjct 974376 GGAGCAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCC 974317 Query 110847 A--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGG 110904 | | | || || || || | |||||||||| || || || | || | ||| || || Sbjct 974316 ACAGGTCAGAG-GGCTTGACAT-CCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGG 974259 Query 110905 AGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGCTCGCCTCCA 110963 || |||| || | ||| |||| ||| | | | || | || | || ||||| | Sbjct 974258 TGATCCCTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAA-GCCTCAA 974200 Query 110964 GGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAAT 111023 ||| || || || ||||| |||||||| | |||| || || || || | Sbjct 974199 GGGCCGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACT 974140 Query 111024 CAAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACC 111078 |||| |||| || |||| | || | || || ||||| || ||||| | ||| Sbjct 974139 CAAAGGGCATGCGCAG-GGCA----AGGAAAGCGTCGGCAAGACCCTGGACACCAACACC 974085 Query 111079 AATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTC 111138 ||| |||| ||| ||||| || || || || || || || || ||| || Sbjct 974084 AATGGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATC 974025 Query 111139 AATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATC 111198 ||||| ||| || || | ||| | ||| |||| ||||||||| || | | | || Sbjct 974024 AATGATCTTGTTGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTC 973965 Query 111199 AAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAAC 111258 | | || | | || |||||| || ||||| | || ||||| |||||||| Sbjct 973964 ATAGCAGCCTTCGTTGTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAAC 973905 Query 111259 AGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAAT 111318 ||| |||||| | | |||||| | ||| || || || | |||||| || || Sbjct 973904 AGCAACCTCATCTGGAGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGAT 973845 Query 111319 CGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGG 111378 || |||| ||||| ||||| ||||| |||||| |||||||||||||||||| |||| Sbjct 973844 GGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGG 973785 Query 111379 CGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAA 111437 | || ||||| ||||| | || || || | | ||| | | || | ||| | | Sbjct 973784 GTTACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTG-GGCGCG---GA 973729 Query 111438 TGG-CGTTGG--CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCAC 111494 ||| ||| | | ||||||||| ||| ||||| || | || || || ||||| Sbjct 973728 TGGTCGTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTC-G 973670 Query 111495 CCACCGC-GTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACC 111552 ||| || ||| | || || || || || || || || | || | ||| | ||| Sbjct 973669 CCATAGCAGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATCAGCGTCCA--GTCCAAG 973613 Query 111553 TTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG-GGATGAAAAGAGATCTCT 111609 ||| ||||| ||||||||||| || || |||||||| || | | | || || || | Sbjct 973612 TTCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAG-TCACG 973554 Query 111610 ACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGC 111669 || ||||||| | || ||||| || | ||||||||||| | || || || Sbjct 973553 GGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGC 973494 Query 111670 GTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATT 111723 |||||| ||||| || |||| || | | || ||||| ||| | |||| Sbjct 973493 GTGCCAGGGCTCGAGGTAGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATC 973437 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 ||||| | || ||| ||| || || |||||||| ||||||||||| | || ||| Sbjct 973436 GACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACC 973377 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 || || || ||| ||| |||| | | |||| || || |||||||| Sbjct 973376 GTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACC 973317 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 |||||| ||| || || ||||| | | ||||| | |||||||| | || Sbjct 973316 ACCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCT 973257 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCAT 111962 || ||||| || ||| | |||||| ||||| ||| || || || ||||| || | Sbjct 973256 ATCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGT 973198 Query 111963 TGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTC 112020 |||| ||||| || | || || ||| | | |||| |||||| || ||||||||| Sbjct 973197 TGAACAGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTC 973140 Query 112021 CAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTG 112080 || |||| |||||||| || || |||||| | | || ||||| | ||||| ||| Sbjct 973139 CAGGACACGCTCAATGTCATCTCCCCAGATGCCAACAGACACTCGCATAATCATGTGCTG 973080 Query 112081 TGG 112083 ||| Sbjct 973079 TGG 973077 >seq8 Length=2103943 Score = 118 bits (130), Expect = 1e-21 Identities = 527/816 (65%), Gaps = 23/816 (3%) Strand=Plus/Minus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| |||| |||||||| |||||||||||||| ||| | || |||||| ||||| Sbjct 374300 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTCCATG 374241 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGGG-TGGCACCCCAACTTGTTTGAGGAGACG 122489 ||||| || || || | || | || | | || | | || ||||| Sbjct 374240 AAGTCGAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACA-AGCAGACG 374182 Query 122490 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 122549 ||| | || |||||||||||| |||| | |||||||| || | |||| || Sbjct 374181 ATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGGAGGGCGCA 374122 Query 122550 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 122609 ||||| || || | |||| ||| |||||| || || || | | |||| | | Sbjct 374121 AGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATGTCACG 374062 Query 122610 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGA-AGAGCTCCACG---GCAAACT 122665 ||| ||| | ||| | || | | || || || || || | ||||| | Sbjct 374061 GATCACTTCCTTGCTGGCGCGGTT-CTTGAGGT---GAGAGTGCAGCAGGCAGGCAAAGT 374006 Query 122666 CCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGA 122725 | ||| |||||||| || || || || || || || || ||| ||||| ||||||| Sbjct 374005 CGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGGCATGA 373946 Query 122726 GACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCA 122785 |||| |||||||| | ||| | || | | || | ||| ||||||||||||||| | Sbjct 373945 GACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAA 373886 Query 122786 CACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTC 122844 | ||||| |||| ||||| | ||| ||||| ||| ||| | | | ||| || Sbjct 373885 CGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA-AGAGTTCTTGTCCTGGATCCACTTG 373827 Query 122845 ATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACT-G 122903 || ||||| | |||||||| ||| || || | || | ||||| | || | | | Sbjct 373826 ATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAG 373767 Query 122904 CTTC-TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCAT 122962 || | | | | || ||||| ||||| | || || | || || || ||| | Sbjct 373766 CTGCGCTGGCTGTTC--TCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTCGGAGT 373709 Query 122963 GAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACC 123021 | | | | ||| ||| | || | ||||||| | || || ||| ||||| ||| Sbjct 373708 GGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGGGATCTGGACC 373650 Query 123022 TCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAA 123080 || || | ||| | | | ||||| ||||| ||||| || | |||||||| Sbjct 373649 TC-GCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAAGAA 373591 Query 123081 TGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTC 123137 |||||||||| ||||| | ||| || | || |||| || | |||||||||| Sbjct 373590 GGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGTG 373531 Query 123138 AAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173 ||||| ||||||| ||||| ||||| || ||||| Sbjct 373530 CAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 373495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031505424800