Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq4 219 5e-52 seq8 138 1e-27 >seq4 Length=2906552 Score = 219 bits (242), Expect = 5e-52 Identities = 1169/1842 (63%), Gaps = 49/1842 (3%) Strand=Plus/Minus Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857 |||| | |||| ||||| || ||| ||||| | || ||||||||||| || ||| Sbjct 974839 TCAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 974780 Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917 ||||| || |||||||| || | ||||| || | |||| | || ||| Sbjct 974779 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCC 974720 Query 117918 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 117977 | |||| || ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 974719 TTCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATC 974660 Query 117978 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTCCTGTAGAGGTTCTTAATATC 118033 | | || || || ||| | ||||| || ||| |||| ||| ||| ||||| Sbjct 974659 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATC 974604 Query 118034 ATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCAT 118093 || ||||| | ||| || || ||||| || | | | || | | |||||| Sbjct 974603 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCAT 974544 Query 118094 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAAC 118150 | | |||||||| || | | || |||| |||| || |||||||| Sbjct 974543 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAAC 974487 Query 118151 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 118210 ||||| || || ||| |||| | | ||||| |||| ||||| ||||| ||||| Sbjct 974486 TTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 974427 Query 118211 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 118270 ||| ||||| |||| || |||| || ||| || ||||| || || | ||| | ||| Sbjct 974426 CTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCT 974367 Query 118271 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGC 118328 ||| || ||| | ||| | || | |||||||| | |||||| || | | | || Sbjct 974366 GTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAGA 974307 Query 118329 TTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCA 118388 | || | | |||||| || || |||||||| || | ||| || || ||||||| Sbjct 974306 G--GGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTG 974249 Query 118389 AATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGA 118448 |||| || || || ||||| |||| || | || ||||| ||||| || || Sbjct 974248 AATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGG 974189 Query 118449 TACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAG 118507 || || || ||||| || | |||| || | | ||||| || ||||| | | Sbjct 974188 TAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAG-CCTCGGGAGACTCAAAGGGCAT 974130 Query 118508 TCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 118567 || || || | || || ||||| |||||||| | ||||| || || || | Sbjct 974129 GCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCG 974070 Query 118568 CATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 118627 ||| || || || || || || || || ||| ||| || | | | || || Sbjct 974069 CATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGTTGAG 974010 Query 118628 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 118687 || | || ||||| |||| |||||||||||| | | ||| | | || | Sbjct 974009 GTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTTCGTT 973950 Query 118688 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747 | || |||||| ||| ||||| | || |||| || || |||| |||||| Sbjct 973949 GTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTGG 973890 Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTT 118807 | || |||||| ||||| || ||||| | ||| || || ||||| |||| |||||| Sbjct 973889 AGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTT 973830 Query 118808 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 118867 || || ||| ||| || ||||||||||| |||||| | || | || ||||| || Sbjct 973829 CTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGT 973770 Query 118868 TTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAG-TGG-CGTTGG--CTC 118923 |||| | || || | | ||| || | | | ||| | | ||| ||| | | | Sbjct 973769 CTGGGCTTCCAGGATGGAATACCA--CAGCTTCTG--GGCGCGGATGGTCGTGCGACCAC 973714 Query 118924 GCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 118983 | ||||| | ||| ||||| || | || || || || || || | || | | Sbjct 973713 GTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCCATAGCAGTCAGCAA 973654 Query 118984 GCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCT--CAACCCGCT 119040 | || || || || |||| || | || | ||| | ||| || | |||| |||| Sbjct 973653 GGCCAGG-GCATTCGTTGGGGCACATCAGCGTCCAGT--CCAAGTTCTTTTCAACACGCT 973597 Query 119041 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 119100 |||||||||| || || |||||||| || ||| | || || ||| | ||||| | Sbjct 973596 TCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCT 973537 Query 119101 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 119160 || || || || | || | || || | || || |||||||| || || |||| Sbjct 973536 TGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGT 973477 Query 119161 ACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGG 119214 | | || | | || | |||| |||| |||| | ||||| || |||||| Sbjct 973476 AGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGT 973420 Query 119215 CGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATAC 119274 ||| || || |||||||| ||||| ||||| | || || || || || ||| Sbjct 973419 TGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGT 973360 Query 119275 GAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 119334 ||| |||| | || ||||| || || |||||||| || ||| ||| || | Sbjct 973359 AAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAA 973300 Query 119335 TTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 119394 | || || | | ||| || ||||||| || || || || |||| | ||| Sbjct 973299 TCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGA 973240 Query 119395 TGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTC 119453 | |||||| |||| || |||||| || ||||| |||||||| || || || | Sbjct 973239 CCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAG 973181 Query 119454 GCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGT 119511 || ||| ||| | | |||| |||||| || ||| ||||||| ||| ||||| Sbjct 973180 GCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGT 973123 Query 119512 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGA 119571 | || || || || | || || ||||||| ||||| || || || | | Sbjct 973122 CATCTCCCCAGATGCCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCT 973063 Query 119572 TACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 119613 | ||||| ||| || | ||||| | ||||| ||||||| Sbjct 973062 TGCCATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGA 973021 >seq8 Length=2103943 Score = 138 bits (152), Expect = 1e-27 Identities = 528/819 (64%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| | || ||||||||||||||||| ||||| || | | || |||||||| Sbjct 374300 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTCCATG 374241 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| || || | || | || | | | | || ||||| Sbjct 374240 AAGTCGAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACA-AGCAGACG 374182 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | |||| |||||||||||| |||| | ||||||||| || | |||| || Sbjct 374181 ATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGGAGGGCGCA 374122 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| || || | |||| | | |||||| ||||| || | |||| | | Sbjct 374121 AGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATGTCACG 374062 Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGA----AGAGTTCCAC-----GGC 130017 || ||| ||| | |||| |||||| ||||| | | ||| Sbjct 374061 GATCACTTCCTTGC--------TGGCGCGGT-TCTTGAGGTGAGAGTGCAGCAGGCAGGC 374011 Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077 ||| || ||| |||||||||||||| |||||||| || || || ||| |||||| || Sbjct 374010 AAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGG 373951 Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137 ||||||||| |||||||| | |||||| || | ||| | || ||||||||| || Sbjct 373950 CATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACC 373891 Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCA 130197 ||| || || || |||| || |||| |||||||| | ||| | | ||| Sbjct 373890 CTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATCCA 373831 Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA- 130256 ||| || ||||| | ||||| || || || || | ||||| || || | |||| Sbjct 373830 CTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAG 373771 Query 130257 GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 130315 || || | | ||| | || |||||||| |||| ||||| || || || ||| Sbjct 373770 GTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTCG 373713 Query 130316 CCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 130374 |||| | | ||| || | ||| | ||||||| | || || ||| ||||| Sbjct 373712 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTG 373654 Query 130375 TACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434 ||||| | ||| | | ||||| ||||| ||||| || | ||||| Sbjct 373653 GACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAA 373594 Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 130491 || |||||||| | ||||| | || || | ||||||| || | |||||||| Sbjct 373593 GAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTC 373534 Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 || |||||||| || ||||| | ||| || || ||||| Sbjct 373533 GTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 373495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434712982280