Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq4 219 5e-52
seq8 138 1e-27
>seq4
Length=2906552
Score = 219 bits (242), Expect = 5e-52
Identities = 1169/1842 (63%), Gaps = 49/1842 (3%)
Strand=Plus/Minus
Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857
|||| | |||| ||||| || ||| ||||| | || ||||||||||| || |||
Sbjct 974839 TCAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTC 974780
Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917
||||| || |||||||| || | ||||| || | |||| | || |||
Sbjct 974779 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCC 974720
Query 117918 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 117977
| |||| || ||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct 974719 TTCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATC 974660
Query 117978 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTCCTGTAGAGGTTCTTAATATC 118033
| | || || || ||| | ||||| || ||| |||| ||| ||| |||||
Sbjct 974659 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATC 974604
Query 118034 ATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCAT 118093
|| ||||| | ||| || || ||||| || | | | || | | ||||||
Sbjct 974603 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCAT 974544
Query 118094 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAAC 118150
| | |||||||| || | | || |||| |||| || ||||||||
Sbjct 974543 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAAC 974487
Query 118151 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 118210
||||| || || ||| |||| | | ||||| |||| ||||| ||||| |||||
Sbjct 974486 TTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 974427
Query 118211 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 118270
||| ||||| |||| || |||| || ||| || ||||| || || | ||| | |||
Sbjct 974426 CTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCT 974367
Query 118271 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA--GTTGAGC 118328
||| || ||| | ||| | || | |||||||| | |||||| || | | | ||
Sbjct 974366 GTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAGA 974307
Query 118329 TTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCA 118388
| || | | |||||| || || |||||||| || | ||| || || |||||||
Sbjct 974306 G--GGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTG 974249
Query 118389 AATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGA 118448
|||| || || || ||||| |||| || | || ||||| ||||| || ||
Sbjct 974248 AATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGG 974189
Query 118449 TACATTGTTTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTCGTCGGAATCAAACGCGAG 118507
|| || || ||||| || | |||| || | | ||||| || ||||| | |
Sbjct 974188 TAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAG-CCTCGGGAGACTCAAAGGGCAT 974130
Query 118508 TCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCT 118567
|| || || | || || ||||| |||||||| | ||||| || || || |
Sbjct 974129 GCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCG 974070
Query 118568 CATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAG 118627
||| || || || || || || || || ||| ||| || | | | || ||
Sbjct 974069 CATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAGTGATTGACATCAATGATCTTGTTGAG 974010
Query 118628 ATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTC 118687
|| | || ||||| |||| |||||||||||| | | ||| | | || |
Sbjct 974009 GTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTTCGTT 973950
Query 118688 TTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTT 118747
| || |||||| ||| ||||| | || |||| || || |||| ||||||
Sbjct 973949 GTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTGG 973890
Query 118748 ATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTT 118807
| || |||||| ||||| || ||||| | ||| || || ||||| |||| ||||||
Sbjct 973889 AGCACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTT 973830
Query 118808 TTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGT 118867
|| || ||| ||| || ||||||||||| |||||| | || | || ||||| ||
Sbjct 973829 CTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGT 973770
Query 118868 TTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAG-TGG-CGTTGG--CTC 118923
|||| | || || | | ||| || | | | ||| | | ||| ||| | | |
Sbjct 973769 CTGGGCTTCCAGGATGGAATACCA--CAGCTTCTG--GGCGCGGATGGTCGTGCGACCAC 973714
Query 118924 GCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGA 118983
| ||||| | ||| ||||| || | || || || || || || | || | |
Sbjct 973713 GTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCCTCGCCATAGCAGTCAGCAA 973654
Query 118984 GCCCTGGTGCCTTATCTGGG-CAGAAGAGAGACCATTGACCACCCTCCT--CAACCCGCT 119040
| || || || || |||| || | || | ||| | ||| || | |||| ||||
Sbjct 973653 GGCCAGG-GCATTCGTTGGGGCACATCAGCGTCCAGT--CCAAGTTCTTTTCAACACGCT 973597
Query 119041 TCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCAT 119100
|||||||||| || || |||||||| || ||| | || || ||| | ||||| |
Sbjct 973596 TCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCT 973537
Query 119101 CCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGT 119160
|| || || || | || | || || | || || |||||||| || || ||||
Sbjct 973536 TGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGT 973477
Query 119161 ACACCGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGG 119214
| | || | | || | |||| |||| |||| | ||||| || ||||||
Sbjct 973476 AGATGGCAAAGGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGT 973420
Query 119215 CGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATAC 119274
||| || || |||||||| ||||| ||||| | || || || || || |||
Sbjct 973419 TGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGT 973360
Query 119275 GAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGA 119334
||| |||| | || ||||| || || |||||||| || ||| ||| || |
Sbjct 973359 AAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAA 973300
Query 119335 TTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGA 119394
| || || | | ||| || ||||||| || || || || |||| | |||
Sbjct 973299 TCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGA 973240
Query 119395 TGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTC 119453
| |||||| |||| || |||||| || ||||| |||||||| || || || |
Sbjct 973239 CCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAG 973181
Query 119454 GCGTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGT 119511
|| ||| ||| | | |||| |||||| || ||| ||||||| ||| |||||
Sbjct 973180 GCATGGGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGT 973123
Query 119512 CTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGA 119571
| || || || || | || || ||||||| ||||| || || || | |
Sbjct 973122 CATCTCCCCAGATGCCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCT 973063
Query 119572 TACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 119613
| ||||| ||| || | ||||| | ||||| |||||||
Sbjct 973062 TGCCATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGA 973021
>seq8
Length=2103943
Score = 138 bits (152), Expect = 1e-27
Identities = 528/819 (64%), Gaps = 29/819 (4%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
||||| | || ||||||||||||||||| ||||| || | | || ||||||||
Sbjct 374300 TAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCACCGAGAGAAATGTTCTCCATG 374241
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846
|| || || ||||| || || | || | || | | | | || |||||
Sbjct 374240 AAGTCGAAGGGGTTGGCAGACTTGTAGATCTTCTCGTTGCCGAGAGCGACA-AGCAGACG 374182
Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906
||| | |||| |||||||||||| |||| | ||||||||| || | |||| ||
Sbjct 374181 ATCGGCGACGAACTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCAAGGAGGGCGCA 374122
Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966
||||| || || | |||| | | |||||| ||||| || | |||| | |
Sbjct 374121 AGGGAGAGCCTCGGTCAAGAACTCTTGCTCAATTCGGACAGCATCGGTGATGATGTCACG 374062
Query 129967 AATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGA----AGAGTTCCAC-----GGC 130017
|| ||| ||| | |||| |||||| ||||| | | |||
Sbjct 374061 GATCACTTCCTTGC--------TGGCGCGGT-TCTTGAGGTGAGAGTGCAGCAGGCAGGC 374011
Query 130018 AAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGG 130077
||| || ||| |||||||||||||| |||||||| || || || ||| |||||| ||
Sbjct 374010 AAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACCAGG 373951
Query 130078 CATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCC 130137
||||||||| |||||||| | |||||| || | ||| | || ||||||||| ||
Sbjct 373950 CATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACC 373891
Query 130138 CTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCA 130197
||| || || || |||| || |||| |||||||| | ||| | | |||
Sbjct 373890 CTCAACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGGATCCA 373831
Query 130198 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGA- 130256
||| || ||||| | ||||| || || || || | ||||| || || | ||||
Sbjct 373830 CTTGATGGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAG 373771
Query 130257 GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 130315
|| || | | ||| | || |||||||| |||| ||||| || || || |||
Sbjct 373770 GTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTATCGATGAGCAGGGAGTAGGTCTCG 373713
Query 130316 CCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 130374
|||| | | ||| || | ||| | ||||||| | || || ||| |||||
Sbjct 373712 GAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATCTG 373654
Query 130375 TACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 130434
||||| | ||| | | ||||| ||||| ||||| || | |||||
Sbjct 373653 GACCTCGCCACTAAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCAAA 373594
Query 130435 AAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTC 130491
|| |||||||| | ||||| | || || | ||||||| || | ||||||||
Sbjct 373593 GAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTC 373534
Query 130492 GTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|| |||||||| || ||||| | ||| || || |||||
Sbjct 373533 GTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 373495
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434712982280
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