Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 242 4e-59 seq8 167 3e-36 >seq4 Length=2906552 Score = 242 bits (268), Expect = 4e-59 Identities = 924/1432 (65%), Gaps = 29/1432 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| | ||||| ||| | | || || || || |||||||| |||| Sbjct 973077 CCACAGCACATGATTATGCGAGTGTCTGTTGGCATCTGGGGAGATGACATTGAGCGTGTC 973136 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 ||||||||||| || |||||| |||| | | ||| || || | || ||||| | Sbjct 973137 CTGGAGACATACAACCTCATGTCCAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTGT 973194 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 |||| || ||||| || |||| ||||| |||||| | ||| || ||||| | Sbjct 973195 TCAACGCAGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGACG 973254 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 | || | |||||||| | ||||| | | ||||| || || ||| ||||| Sbjct 973255 ATAGCATTGAGGGTATCTACGACACTCTGAAGACATGTGCCATGATTTCCAAGATGGCTG 973314 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519 | |||||||| || || |||| | | |||| ||| ||| || || | Sbjct 973315 GTGGTATTGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACCA 973374 Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579 | ||| || | ||||||||||| |||||||| || || ||| ||| || | |||| Sbjct 973375 ACGGTACCTCTAACGGTATTATTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATATG 973434 Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633 | |||| | ||| ||||| || | | || |||| || ||||| |||| Sbjct 973435 TCGATCAGGGTGGTAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCCTGGC 973491 Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693 |||| || || | ||||||||||| | || ||||| || | || |||| || Sbjct 973492 ACGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGCG 973551 Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 ||| || | ||| |||||||||||||| ||||||||||||||| | ||||| ||| Sbjct 973552 CCCGTGACTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAAAAGA 973611 Query 104754 G--TGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGA-TGCCGTG 104809 ||| | ||| | || | || || || || || ||||| || | || ||| || Sbjct 973612 ACTTGG--ACTGGACGCTGATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTATG 973668 Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869 | ||||| || || || | || ||||| ||| | || || || | |||| Sbjct 973669 GC-GAGGAATTCGAGGCTTTGTATGAGAAGTATGAGAAGGAGGGACGTGGTCGCACGACC 973727 Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928 | | || | || | ||||| | | || || | | || || |||||||||| || Sbjct 973728 ATCCGCGCC-CAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACTGAGACTGGTAACCC 973786 Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988 | |||||| ||||| || ||||| |||| ||||| || || ||||| |||| || Sbjct 973787 CTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCAT 973846 Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048 | || ||||| ||||| || || || | || | | ||||||| ||||| Sbjct 973847 CCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTGTGCTCCAGATGAGGTTGCTGT 973906 Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTT 105106 || ||| | || || | || ||||| ||||| ||| | | || ||| | | | Sbjct 973907 TTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTATGTCGATT-ACA-ACGAAGGCTGCTAT 973964 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 || | | | || || || ||||| || || || | ||||| |||| | ||| Sbjct 973965 GACTTTAAGAAGCTTCATGAAGTCACCAAGGTGGTTGTCCGCAACCTCAACAAGATCATT 974024 Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226 ||| ||| ||||| || || || || || || ||| | ||||| || ||| Sbjct 974025 GATGTCAATCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCACCGACCCATT 974084 Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTC 105285 ||| | ||||| |||||||| || || | ||| || | || ||| | ||||| || Sbjct 974085 GGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCCCTG-CGCATGCCCTTTGAGTC 974143 Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345 ||| || | | || || || ||||||||||| || || || || ||||| Sbjct 974144 TCCCGAGGCTCGTCAGCTGAACAAGCAGATCTTTGAGACCATCTACCATGCGGCCCTTGA 974203 Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405 ||| | ||| | || |||| || ||||| || ||| | || |||| || || || Sbjct 974204 GGCTTCTATGGAGATCGCCAAGGTGGAGGGTCCCTACGAATCATTCAAGGGATCACCTGC 974263 Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTG 105465 || | || | || ||||| || |||||||| | || || | | || || Sbjct 974264 ATCCGAGGGCATCCTCCAATTCGACATGTGGGATGTCAAGCCCTCTGACCTGTGGGAGTG 974323 Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525 ||| | |||||||| | ||||||||| | ||| || ||||| | ||| | || || Sbjct 974324 GGACTCGCTCAAGGAGCAGATCAAGGAGCACGGTACGCGCAACAGCTTGCTCCTCGCCCC 974383 Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585 |||||||| ||| || | || || |||| || || || ||||| || |||||||| Sbjct 974384 TATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTACAC 974443 Query 105586 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637 | |||||||| | | || | ||| || || ||||| |||||||| Sbjct 974444 TTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAAGTTGTCAAC 974495 >seq8 Length=2103943 Score = 167 bits (184), Expect = 3e-36 Identities = 358/523 (68%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497 ||||| || |||||| | ||||| || |||||| || |||| ||||| | | | || Sbjct 373495 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 373554 Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557 || | || ||| | ||||| |||||||||| |||||||| | || ||||| ||| Sbjct 373555 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATT 373614 Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616 || ||||| | | |||| || ||||| || |||| | || || ||| Sbjct 373615 GTCAACGAGAACCTGGTCGAGCGCTTTAGTGGCGAGGTCCAGATCCCC-GAGGCTCGATG 373673 Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675 |||||| | | ||| |||| ||| | | | || ||||| ||| |||| Sbjct 373674 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 373732 Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAA-GAAGC-AGCTCTTTGAAGCCATCCAAAC 94733 | || | || || ||||| | | | | | ||| | ||||| | ||||| | || Sbjct 373733 TCGATACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 373790 Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792 |||| || |||| ||||| || || ||||| || |||||| | | |||| | | Sbjct 373791 CATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAACTC 373850 Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852 ||||||||| |||| || | || ||||| |||||||||||||||||| ||| Sbjct 373851 -TTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTG 373909 Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912 |||| | | || | |||||||||||||||||||||||||| ||||| ||| |||| Sbjct 373910 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 373969 Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||| ||||||||||||||||| || ||| || ||||| Sbjct 373970 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGC 374012 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260340682120