Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq4 242 4e-59
seq8 167 3e-36
>seq4
Length=2906552
Score = 242 bits (268), Expect = 4e-59
Identities = 924/1432 (65%), Gaps = 29/1432 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| | ||||| ||| | | || || || || |||||||| ||||
Sbjct 973077 CCACAGCACATGATTATGCGAGTGTCTGTTGGCATCTGGGGAGATGACATTGAGCGTGTC 973136
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339
||||||||||| || |||||| |||| | | ||| || || | || ||||| |
Sbjct 973137 CTGGAGACATACAACCTCATGTCCAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTGT 973194
Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399
|||| || ||||| || |||| ||||| |||||| | ||| || ||||| |
Sbjct 973195 TCAACGCAGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGACG 973254
Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459
| || | |||||||| | ||||| | | ||||| || || ||| |||||
Sbjct 973255 ATAGCATTGAGGGTATCTACGACACTCTGAAGACATGTGCCATGATTTCCAAGATGGCTG 973314
Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 104519
| |||||||| || || |||| | | |||| ||| ||| || || |
Sbjct 973315 GTGGTATTGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACCA 973374
Query 104520 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 104579
| ||| || | ||||||||||| |||||||| || || ||| ||| || | ||||
Sbjct 973375 ACGGTACCTCTAACGGTATTATTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATATG 973434
Query 104580 TAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
| |||| | ||| ||||| || | | || |||| || ||||| ||||
Sbjct 973435 TCGATCAGGGTGGTAACAAGCGTCCT---GGTGCCTTTGCCATCTACCTCGAGCCCTGGC 973491
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|||| || || | ||||||||||| | || ||||| || | || |||| ||
Sbjct 973492 ACGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGCG 973551
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
||| || | ||| |||||||||||||| ||||||||||||||| | ||||| |||
Sbjct 973552 CCCGTGACTTGTTCCTTGCTCTCTGGATTCCCGATCTCTTCATGAAGCGTGTTGAAAAGA 973611
Query 104754 G--TGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGA-TGCCGTG 104809
||| | ||| | || | || || || || || ||||| || | || ||| ||
Sbjct 973612 ACTTGG--ACTGGACGCTGATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTATG 973668
Query 104810 GGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACG 104869
| ||||| || || || | || ||||| ||| | || || || | ||||
Sbjct 973669 GC-GAGGAATTCGAGGCTTTGTATGAGAAGTATGAGAAGGAGGGACGTGGTCGCACGACC 973727
Query 104870 GTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACC 104928
| | || | || | ||||| | | || || | | || || |||||||||| ||
Sbjct 973728 ATCCGCGCC-CAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACTGAGACTGGTAACCC 973786
Query 104929 ATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGAT 104988
| |||||| ||||| || ||||| |||| ||||| || || ||||| |||| ||
Sbjct 973787 CTTCATGCTCTACAAGGATGCCTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACCAT 973846
Query 104989 CAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGT 105048
| || ||||| ||||| || || || | || | | ||||||| |||||
Sbjct 973847 CCGCAGCTCCAACCTCTGCACCGAGATTATCGAGTACTGTGCTCCAGATGAGGTTGCTGT 973906
Query 105049 GTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA--TTT 105106
|| ||| | || || | || ||||| ||||| ||| | | || ||| | | |
Sbjct 973907 TTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTATGTCGATT-ACA-ACGAAGGCTGCTAT 973964
Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166
|| | | | || || || ||||| || || || | ||||| |||| | |||
Sbjct 973965 GACTTTAAGAAGCTTCATGAAGTCACCAAGGTGGTTGTCCGCAACCTCAACAAGATCATT 974024
Query 105167 GATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATT 105226
||| ||| ||||| || || || || || || ||| | ||||| || |||
Sbjct 974025 GATGTCAATCACTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCACCGACCCATT 974084
Query 105227 GGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTGATTC 105285
||| | ||||| |||||||| || || | ||| || | || ||| | ||||| ||
Sbjct 974085 GGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCCCTG-CGCATGCCCTTTGAGTC 974143
Query 105286 CGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGA 105345
||| || | | || || || ||||||||||| || || || || |||||
Sbjct 974144 TCCCGAGGCTCGTCAGCTGAACAAGCAGATCTTTGAGACCATCTACCATGCGGCCCTTGA 974203
Query 105346 GGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGC 105405
||| | ||| | || |||| || ||||| || ||| | || |||| || || ||
Sbjct 974204 GGCTTCTATGGAGATCGCCAAGGTGGAGGGTCCCTACGAATCATTCAAGGGATCACCTGC 974263
Query 105406 TTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGACTG 105465
|| | || | || ||||| || |||||||| | || || | | || ||
Sbjct 974264 ATCCGAGGGCATCCTCCAATTCGACATGTGGGATGTCAAGCCCTCTGACCTGTGGGAGTG 974323
Query 105466 GGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525
||| | |||||||| | ||||||||| | ||| || ||||| | ||| | || ||
Sbjct 974324 GGACTCGCTCAAGGAGCAGATCAAGGAGCACGGTACGCGCAACAGCTTGCTCCTCGCCCC 974383
Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585
|||||||| ||| || | || || |||| || || || ||||| || ||||||||
Sbjct 974384 TATGCCAACTGCCAGTACGTCCCAGATTCTGGGCAACAACGAGTGCTTCGAGCCCTACAC 974443
Query 105586 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637
| |||||||| | | || | ||| || || ||||| ||||||||
Sbjct 974444 TTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAAGTTGTCAAC 974495
>seq8
Length=2103943
Score = 167 bits (184), Expect = 3e-36
Identities = 358/523 (68%), Gaps = 13/523 (2%)
Strand=Plus/Plus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497
||||| || |||||| | ||||| || |||||| || |||| ||||| | | | ||
Sbjct 373495 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 373554
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
|| | || ||| | ||||| |||||||||| |||||||| | || ||||| |||
Sbjct 373555 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATT 373614
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| ||||| | | |||| || ||||| || |||| | || || |||
Sbjct 373615 GTCAACGAGAACCTGGTCGAGCGCTTTAGTGGCGAGGTCCAGATCCCC-GAGGCTCGATG 373673
Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||| | | ||| |||| ||| | | | || ||||| ||| ||||
Sbjct 373674 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 373732
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAA-GAAGC-AGCTCTTTGAAGCCATCCAAAC 94733
| || | || || ||||| | | | | | ||| | ||||| | ||||| | ||
Sbjct 373733 TCGATACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 373790
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
|||| || |||| ||||| || || ||||| || |||||| | | |||| | |
Sbjct 373791 CATTCCTTGCATTCGCAAGAAGGCCGACTGGGCCATCAAGTGGATCCAGGACAAGAACTC 373850
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
||||||||| |||| || | || ||||| |||||||||||||||||| |||
Sbjct 373851 -TTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTTGAGGGTATCTTCTTCAGCGGTG 373909
Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912
|||| | | || | |||||||||||||||||||||||||| ||||| ||| ||||
Sbjct 373910 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 373969
Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||||| ||||||||||||||||| || ||| || |||||
Sbjct 373970 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACCGACTTTGC 374012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260340682120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |