Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq4 262 4e-65
seq7 203 4e-47
seq2 129 7e-25
seq3 120 3e-22
>seq4
Length=2906552
Score = 262 bits (290), Expect = 4e-65
Identities = 1158/1808 (64%), Gaps = 79/1808 (4%)
Strand=Plus/Minus
Query 79987 GCCGCCTGATCAACGGGTACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGCAGA 80046
||| |||||||||||| | | ||||| || ||| ||| | || |||||
Sbjct 974848 GCCTCCTGATCAACGG------TGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGG 974795
Query 80047 TAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTC 80106
||||||||||| |||||||| || ||||||||| | |||||| | | |||
Sbjct 974794 TAGTACATGCCGGTCTTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTG 974735
Query 80107 GCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCA 80166
| | |||||| | || |||| ||||||||| ||||| |||||| |||||||| |||
Sbjct 974734 CCCATTGTGGGATCCTTCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCA 974675
Query 80167 CGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATACA-- 80224
||||| || ||||| | | |||| || | ||| ||||| || || || |
Sbjct 974674 CGATCAGCTGCCATCTGGACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGG 974615
Query 80225 -CCTTACGAAGCTCCTCTGGAATGTCCAGATTTTGCACACTGCCACCGTCCTTTACAATT 80283
|||| | || || || |||| | | | | | || |||| || ||||
Sbjct 974614 GCCTTGATA---TCTTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATG 974558
Query 80284 TGA---TTTTTCAATTCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCACAAG---G 80337
| || |||| || | ||||| || | | ||| || || | ||| |
Sbjct 974557 ATACGGTTCTTCATGGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAG 974498
Query 80338 TGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTG 80397
| ||| || | || ||||| || || ||| || ||| | || | ||| | ||||
Sbjct 974497 GGGTTGACAA-CTTGG--AACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTG 974441
Query 80398 TAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGG 80457
|| ||||| || ||||||||| || || ||||| | ||| || || || ||||| |||
Sbjct 974440 TAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGG 974381
Query 80458 CCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATATCCTC---GCGCAAATCTGAC 80514
||| | || || ||| ||||||| |||||| | ||| | || | || ||
Sbjct 974380 GCGAGGAGCAAGCTGTTGCGCGTACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCAC 974321
Query 80515 ---CAAAAATCAACCCCAACGCTGTGAC--CCCACATGTCGTGCTGCAAGATGCCCTCCG 80569
|| | ||| | ||| |||| ||||||||||| || | ||||||||| |
Sbjct 974320 TCCCACAGGTCAG----AGGGCT-TGACATCCCACATGTCGAATTGGAGGATGCCCTCGG 974266
Query 80570 ACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGACT 80629
| || || || ||| ||| | ||||| || |||||| |||||| | ||| ||
Sbjct 974265 ATGCAGGTGATCCCTTGAATGATTCGTAGGGACCCTCCACCTTGGCGATCTCCATAGAAG 974206
Query 80630 CCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTG 80689
|| ||||||||| || || ||| |||||||| |||||||| || |||| |
Sbjct 974205 CCTCAAGGGCCGCATGGTAGATGGTCTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGG 974146
Query 80690 GGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGG 80749
| || || | || || || | ||| |||| || || ||||| || || |
Sbjct 974145 GAGACTCAAAGGGCATGCGCAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACAC 974086
Query 80750 CGATCGGGCGGTGGCGCTTGTT-CGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATT- 80807
| || || ||||||||| |||| | | || ||||||| | | |||| ||| |||
Sbjct 974085 CAATGGGTCGGTGGCGCATGTTGCTGTTGC-GGGCCTCCTGGACAGGGT---AGTGATTG 974030
Query 80808 --ATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGA 80865
||| |||| ||| |||||||| ||| ||| || || |||||||| |||| |
Sbjct 974029 ACATCAATGATCTTGTTGAGGTTGCGGACAACCACCTTGGTGACTTCATGAAGCTTCTTA 973970
Query 80866 AAGTC------GAATTGGTTCCCCTTCACAAATGCCGGAAGGCTCAGGGACGCCAGATTG 80919
||||| | || ||| | ||| | || || ||| || || |||| |||
Sbjct 973969 AAGTCATAGCAGCCTTCGTTGTAATCGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTG 973910
Query 80920 CACACGGCCACCTCTTC---AGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAA 80976
|| || || ||||| || |||| | || |||||| || || ||||| | || ||
Sbjct 973909 CAAACAGCAACCTCATCTGGAGCA-CAGT--ACTCGATAATCTCGGTGCAGAGGTTGGAG 973853
Query 80977 GACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCAC 81036
|| || |||||||| |||||||| |||| |||||| || ||||||||| |
Sbjct 973852 CTGCGGATGGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGC 973793
Query 81037 ATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCC 81096
||| | ||| |||| ||||| ||| | | ||||||| | ||| | || | ||
Sbjct 973792 ATGAAGGGGTTACCAGTCTCAGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGGGCG 973733
Query 81097 TTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTAAGCTTCGTCGAACTTG 81156
|| | |||| || || | ||||||| | || | ||||| |
Sbjct 973732 CGGATGGTCGTGCGACCACGTCCCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTCC 973673
Query 81157 GCACCGT-GAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGT 81215
| || | | || |||| ||| | ||||| ||||| ||||||||||| ||||||
Sbjct 973672 TCGCCATAGCAG-TCAGCAAGGCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTCCAA 973614
Query 81216 GTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCG 81275
|| || || ||| ||||||||| || || |||||||| || ||||| ||| ||
Sbjct 973613 GTTCTTTTCAACACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACG 973554
Query 81276 GCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCCATGATGTCCGC 81335
| ||| |||| || | || ||||| ||| | || || || || | || ||| ||
Sbjct 973553 GGCGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGC 973494
Query 81336 ATGCCATGGCTCCAGATACACGGCGATCG-AC-----CCCTTGCGACGGCCACCCTGGTT 81389
||||| ||||| || || | ||| | | || | |||| | |||||||| |
Sbjct 973493 GTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTA---CCACCCTGATC 973437
Query 81390 GACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACC 81449
||| || | |||||| ||| || || || | ||| || || ||||| | || |||
Sbjct 973436 GACATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTAGAGGTACC 973377
Query 81450 GTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGA-----AAGACCG 81504
||| || || | || || || |||| || | ||| | | || ||| ||
Sbjct 973376 GTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGA---TGC-GGTGGACGTTCAAG-CCA 973322
Query 81505 ATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCG 81564
|| ||||| | | ||| |||||| ||||| |||| || || || || |||||
Sbjct 973321 ATACCACCAGCCATCTTGGAAATCATGGCACATGTCTTCAGAGTGTCGTAGATACCCTCA 973262
Query 81565 ATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAG--C 81622
|||||||| | |||||||| | |||||| || |||| || |||| | | | |
Sbjct 973261 ATGCTATCGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCT--GGGCCTGCGGGGTAC 973204
Query 81623 CGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGG 81682
| || |||||||| || |||| || || |||| | | | ||||| |||| || |
Sbjct 973203 CTGCGTTGAACAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAGGTTGTATG 973144
Query 81683 TTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGT 81742
| ||| ||| || ||| || || || || || | || || ||||||| |||||
Sbjct 973143 TCTCCAGGACACGCTCAATGTCATCTCCCCAGATGCCAACAGACACTCGCATAATCATGT 973084
Query 81743 ACTGGGGC 81750
||| |||
Sbjct 973083 GCTGTGGC 973076
>seq7
Length=2414983
Score = 203 bits (224), Expect = 4e-47
Identities = 181/227 (80%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||||||||| |||||||| || ||||||||||| || || || ||||| |||||
Sbjct 115934 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCC 115993
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|||| ||| | ||| ||||| | || || |||||||||||||| |||||||| ||||||
Sbjct 115994 GATACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 116053
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
|||||||| ||||| ||||| |||||||||||||||| || || || | ||||| ||
Sbjct 116054 CAGCGTCTGATTTTCGCTGGCAAGCAACTCGAGGATGGCCGAACTCTGTCCGACTACAAC 116113
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| ||||| || || || ||| | || ||||| |||||
Sbjct 116114 ATCCAGAAGGAGTCCACCCTCCACCTGGTCCTCCGCCTTCGTGGTGG 116160
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
||||| || || |||||||| || || || ||||| || || |||||||| |||||
Sbjct 819680 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 819739
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | ||| | ||| | || || |||||||||||||| ||||| || ||||||
Sbjct 819740 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 819799
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585
||||| | || || ||||||||||| || ||||||| || ||||| | ||||| ||
Sbjct 819800 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGAACCCTCTCCGACTACAAC 819859
Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| || || || || || ||| |||| || || |||||
Sbjct 819860 ATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGG 819906
Score = 109 bits (120), Expect = 6e-19
Identities = 111/142 (78%), Gaps = 2/142 (1%)
Strand=Plus/Plus
Query 27495 TCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACT 27554
||||||||||||||| |||||||| ||||||||||| | || |||||||||||||| ||
Sbjct 116408 TCAGGACAAGGAGGGTATTCCTCCTGACCAGCAGCGCTTGATCTTTGCTGGTAAGCAGCT 116467
Query 27555 CGAGGATGATCGTACCCT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAG 27613
|| || | ||| ||| | ||| ||||| || |||| ||||| ||| || || | |
Sbjct 116468 GGAAGACGGTCGCACCTTGAGC-GACTACAACATCCAGAAGGAGAGCACACTGCACTTGG 116526
Query 27614 TCTTGCGTCTTCGCGGTGGACA 27635
| |||||||||| ||||| ||
Sbjct 116527 TTCTGCGTCTTCGTGGTGGCCA 116548
>seq2
Length=3541710
Score = 129 bits (142), Expect = 7e-25
Identities = 137/181 (76%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 27415 TTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATT 27474
|| || ||||| || || |||||||| || || |||||||| ||||| || | ||
Sbjct 88934 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACGATC 88993
Query 27475 GCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTA 27534
| ||| | ||| | || || |||||||||||||| ||||| || ||||||||||| |
Sbjct 88994 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGATTG 89053
Query 27535 ATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAG 27594
|| |||||||| ||||| |||||||||| || ||||| | ||||| || |||| |||
Sbjct 89054 ATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAAG 89113
Query 27595 G 27595
|
Sbjct 89114 G 89114
>seq3
Length=3158035
Score = 120 bits (132), Expect = 3e-22
Identities = 142/190 (75%), Gaps = 2/190 (1%)
Strand=Plus/Minus
Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465
|| || || || |||||||| || ||||||||||| ||||| ||| |||| || ||
Sbjct 1903587 ATACAGATTTTCGTCAAGACTCTCACCGGCAAGACAATTACCCTTAAGGTGGAATCTTCC 1903528
Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525
|| | ||| | || | ||| | || ||||||||||| ||||| ||||| || ||||||
Sbjct 1903527 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAAGAGGGCATTCCCCCTGACCAG 1903468
Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584
||||| |||| || ||||||||||| || || || | || ||| | ||| ||||| ||
Sbjct 1903467 CAGCGCTTAATCTTCGCTGGTAAGCAGCTGGAAGACGGTCACACCTTGAGC-GACTACAA 1903409
Query 27585 TGTCCAAAAG 27594
|||| |||
Sbjct 1903408 CATCCAGAAG 1903399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570309950880560
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