Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq7 96.9 2e-15
>seq7
Length=2414983
Score = 96.9 bits (106), Expect = 2e-15
Identities = 111/146 (76%), Gaps = 5/146 (3%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--T 34536
||| || | |||||||| ||||| || || ||||||||||| || ||||| || || |
Sbjct 116546 GCCACCACGAAGACGCAGAACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCGCT 116487
Query 34537 GAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGC 34596
|| ||| || ||||||| || || ||||| ||||| || || ||||| ||||| ||
Sbjct 116486 CAAGGTG--CGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGA 116429
Query 34597 GGCACTCCCTCCTTGTCTGTGATCTT 34622
|| | ||||||||||| |||||||
Sbjct 116428 GGAATACCCTCCTTGTC-CTGATCTT 116404
Score = 89.7 bits (98), Expect = 3e-13
Identities = 155/223 (70%), Gaps = 2/223 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| |||| |||| ||||| || |||||| || ||||| || || || || |||||
Sbjct 819897 AGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGG 819838
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || || ||||| || || || || ||||| |||||||| || | ||||||
Sbjct 819837 CCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCC 819778
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
||||| |||||| | || || | || ||||| |||||| || | |||
Sbjct 819777 TTGTCCTGGATCTTG-GACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGT 819719
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
||||| || || || | || || || ||||||||||| |||
Sbjct 819718 GATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 819676
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729358346679
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |