Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3 84.2 2e-11 >seq3 Length=3158035 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/173 (73%), Gaps = 6/173 (3%) Strand=Plus/Plus Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCGATACTCCGCCCCAAA 6912 |||||||| | |||| || | ||||||||| || || || || ||||| || ||||| Sbjct 1641756 AGCTGGTCGACGCCCTTGCCGGCATAGTCCGCCTTTGCGTCCACG-TACTCGGCGCCAAA 1641814 Query 6913 GTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCC 6972 ||| | |||||| || |||||||| ||||||| ||| || |||| || | || | | Sbjct 1641815 GTGCCGCCACTGAAAGCCGTAGACGGGGCCCAGGTCACCGACCTCGCG-GTGGGTCAGGC 1641873 Query 6973 C--CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 | |||| ||| || || || || || || | ||||||||||||| || || Sbjct 1641874 CGACGCT-GTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGACGCC 1641925 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/173 (73%), Gaps = 6/173 (3%) Strand=Plus/Minus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG--GGGGTTCC 34379 || || ||||||||||||| | || || || || || || ||| |||| || | | Sbjct 1641925 GGCGTCAAGATCTGGGACGGCAATGGCTCCCGCGAGTTCCTCGAC-AGCGTCGGCCTGAC 1641867 Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439 | | || |||| || ||| ||||||| |||||||| || |||||| | |||||||| | Sbjct 1641866 CCAC-CGCGAGGTCGGTGACCTGGGCCCCGTCTACGGCTTTCAGTGGCGGCACTTTGGCG 1641808 Query 34440 CGGAGTATCGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCT 34491 | ||||| || || || || ||||||||| | || |||| | |||||||| Sbjct 1641807 CCGAGTA-CGTGGACGCAAAGGCGGACTATGCCGGCAAGGGCGTCGACCAGCT 1641756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262046993360