Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq3 84.2 2e-11
>seq3
Length=3158035
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/173 (73%), Gaps = 6/173 (3%)
Strand=Plus/Plus
Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGC-TTCGCTCCCCCGATACTCCGCCCCAAA 6912
|||||||| | |||| || | ||||||||| || || || || ||||| || |||||
Sbjct 1641756 AGCTGGTCGACGCCCTTGCCGGCATAGTCCGCCTTTGCGTCCACG-TACTCGGCGCCAAA 1641814
Query 6913 GTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCC 6972
||| | |||||| || |||||||| ||||||| ||| || |||| || | || | |
Sbjct 1641815 GTGCCGCCACTGAAAGCCGTAGACGGGGCCCAGGTCACCGACCTCGCG-GTGGGTCAGGC 1641873
Query 6973 C--CGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023
| |||| ||| || || || || || || | ||||||||||||| || ||
Sbjct 1641874 CGACGCT-GTCGAGGAACTCGCGGGAGCCATTGCCGTCCCAGATCTTGACGCC 1641925
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/173 (73%), Gaps = 6/173 (3%)
Strand=Plus/Minus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCG--GGGGTTCC 34379
|| || ||||||||||||| | || || || || || || ||| |||| || | |
Sbjct 1641925 GGCGTCAAGATCTGGGACGGCAATGGCTCCCGCGAGTTCCTCGAC-AGCGTCGGCCTGAC 1641867
Query 34380 CATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGG 34439
| | || |||| || ||| ||||||| |||||||| || |||||| | |||||||| |
Sbjct 1641866 CCAC-CGCGAGGTCGGTGACCTGGGCCCCGTCTACGGCTTTCAGTGGCGGCACTTTGGCG 1641808
Query 34440 CGGAGTATCGGGGGAGCGAA-GCGGACTATTCGGGACAGGGAGCGGACCAGCT 34491
| ||||| || || || || ||||||||| | || |||| | ||||||||
Sbjct 1641807 CCGAGTA-CGTGGACGCAAAGGCGGACTATGCCGGCAAGGGCGTCGACCAGCT 1641756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448262046993360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |