Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq4 165 1e-35
>seq4
Length=2906552
Score = 165 bits (182), Expect = 1e-35
Identities = 445/678 (66%), Gaps = 12/678 (2%)
Strand=Plus/Minus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT--AACTCGTTTCA 78012
||||||||||| || |||||||||| | |||||| || ||| || ||| || ||||
Sbjct 973651 CCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTC--CAAGTTCTTTTCAACACGCTTCA 973594
Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072
| |||||||| || ||||| ||||||| || | || |||| | ||||| || |
Sbjct 973593 TGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTGC 973534
Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132
| ||||| ||||| || ||||| | | || | ||||| || || || || |
Sbjct 973533 CGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGA 973474
Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192
| || | | ||||| || || ||||| |||||||| | ||||||||| ||||| ||
Sbjct 973473 TGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTGA 973414
Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252
| |||| | ||| ||||||||||||||||| || || || || |||| ||| ||| |
Sbjct 973413 ACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAGC 973354
Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312
| | || || || | | | || || || || |||||||| || || | |
Sbjct 973353 CGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGG 973294
Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372
| || |||| || |||||||||||||| || || || ||| |||||| | | |
Sbjct 973293 CACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAAGA 973234
Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432
| || |||| || || || ||||| || || | || || || ||||| |
Sbjct 973233 AGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCATGGG 973174
Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCAT 78488
| || | || || | || |||||||| || | | || ||||| ||
Sbjct 973173 TGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCATCTCCCC 973114
Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548
|||| || || | || ||||| | ||| ||||| || | ||||| |||| |
Sbjct 973113 AGATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCCA 973058
Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608
| | |||| | |||||| ||||||||| || || || || || | ||| |||
Sbjct 973057 TCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAG 972998
Query 78609 TCTCTCTCGTAAATAATA 78626
|||| ||||| | ||||
Sbjct 972997 TCTCGATCGTAGACAATA 972980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668252948320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |