Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq4 165 1e-35 >seq4 Length=2906552 Score = 165 bits (182), Expect = 1e-35 Identities = 445/678 (66%), Gaps = 12/678 (2%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTT--AACTCGTTTCA 78012 ||||||||||| || |||||||||| | |||||| || ||| || ||| || |||| Sbjct 973651 CCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTC--CAAGTTCTTTTCAACACGCTTCA 973594 Query 78013 TAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTC 78072 | |||||||| || ||||| ||||||| || | || |||| | ||||| || | Sbjct 973593 TGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTGC 973534 Query 78073 CTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 78132 | ||||| ||||| || ||||| | | || | ||||| || || || || | Sbjct 973533 CGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGA 973474 Query 78133 TTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTAT 78192 | || | | ||||| || || ||||| |||||||| | ||||||||| ||||| || Sbjct 973473 TGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTGA 973414 Query 78193 AAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTC 78252 | |||| | ||| ||||||||||||||||| || || || || |||| ||| ||| | Sbjct 973413 ACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAGC 973354 Query 78253 CACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAG 78312 | | || || || | | | || || || || |||||||| || || | | Sbjct 973353 CGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATGG 973294 Query 78313 CGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAA 78372 | || |||| || |||||||||||||| || || || ||| |||||| | | | Sbjct 973293 CACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAAGA 973234 Query 78373 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCG 78432 | || |||| || || || ||||| || || | || || || ||||| | Sbjct 973233 AGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCATGGG 973174 Query 78433 TAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCAT 78488 | || | || || | || |||||||| || | | || ||||| || Sbjct 973173 TGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCATCTCCCC 973114 Query 78489 TGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTA 78548 |||| || || | || ||||| | ||| ||||| || | ||||| |||| | Sbjct 973113 AGATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCCA 973058 Query 78549 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 78608 | | |||| | |||||| ||||||||| || || || || || | ||| ||| Sbjct 973057 TCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAAG 972998 Query 78609 TCTCTCTCGTAAATAATA 78626 |||| ||||| | |||| Sbjct 972997 TCTCGATCGTAGACAATA 972980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668252948320