Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq4 188 1e-42
>seq4
Length=2906552
Score = 188 bits (208), Expect = 1e-42
Identities = 1183/1879 (63%), Gaps = 50/1879 (3%)
Strand=Plus/Minus
Query 75373 CAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431
||||| |||| ||||| |||| | || | | ||||| || |||||||| || || |
Sbjct 974838 CAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCT 974779
Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491
| ||||| || |||| || ||| |||||||| || | ||| | |||||
Sbjct 974778 TGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCCT 974719
Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551
|| || || |||| ||||| ||||| |||||||| || | |||||| ||||| |
Sbjct 974718 TCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATCT 974659
Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611
| ||| |||| ||| ||||| | || ||| ||| |||||||| || |
Sbjct 974658 GGACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCTTCGG 974599
Query 75612 GAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668
| | || | | || |||||||| ||| |||| || || ||||| || |||
Sbjct 974598 GGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCATGGCAT 974539
Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728
| ||| | | ||| | | | || || || || |||| ||| || |
Sbjct 974538 CGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACTTGGAACT 974479
Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788
| || | | || | ||| ||| || || || || || || | | || ||||
Sbjct 974478 CGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGT 974419
Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848
| |||| ||| || | || ||||| |||||||| || | | || || || |
Sbjct 974418 TGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGTTGCGCG 974359
Query 75849 GACCATGTGTTC--TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTAC 75906
||| ||| || |||| | || || || | | ||| ||||| || || || ||
Sbjct 974358 TACC--GTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAGAGGGCTT 974301
Query 75907 AACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTC 75966
|||||||| | ||| |||| || || || | | ||| |||||| || ||| |||
Sbjct 974300 GACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAATGATTC 974241
Query 75967 GTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGT 76026
||| | || ||| | || | || | ||||| | || | | || || ||
Sbjct 974240 GTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGGTAGATGGT 974181
Query 76027 TTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAG 76086
|| || |||| ||| || || | | || || || ||||| || ||| | |
Sbjct 974180 CTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAGGGC--ATGCGCAGG 974123
Query 76087 --AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 76144
|| || || || || || ||||| || |||| |||||| |||| || | | | |||
Sbjct 974122 GCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCGCATGTTG 974063
Query 76145 GAAATTTCAG--CTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202
|| | | || ||||| |||||| | ||| | ||| || || || ||||| || |
Sbjct 974062 CTG-TTGCGGGCCTCCTGGAC-AGGGTAGTGATTGACATCAATGATCTTGTTGAGGTTGC 974005
Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT-----AT 76257
|||||| || || || || | || || ||| ||| | || || ||
Sbjct 974004 GGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTTCGTTGTAAT 973945
Query 76258 C-ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGG 76316
| ||| | | || || | ||| || | || ||||| || ||||||| | | |
Sbjct 973944 CGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTGGA---G 973888
Query 76317 CA---TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTT 76373
|| || | || ||||| ||||| || || | ||| ||||| || || | |
Sbjct 973887 CACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCT 973828
Query 76374 GGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCT 76433
|||||||||| ||| || | ||||| || || | || || | ||||| ||| |||
Sbjct 973827 GGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCT 973768
Query 76434 GTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATAGATTTGTATCGCTTC 76492
| | ||| | || || | ||| | | ||| | | || | | | | | | ||
Sbjct 973767 GGGCTTCCAGGATGGAATACCACA-GCTTCTGGGCGCGGATGGTCG--TGCGACCACGTC 973711
Query 76493 TCTCTTTC--ATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAA-CA-TCATCCAA 76548
||| ||| ||| | ||| || || ||||| ||| ||| | || ||| | |
Sbjct 973710 CCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTC--CTCGCCATAGCAGTCAGCAAG 973653
Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT--AACCCGTTTC 76606
||||| ||||| || || ||||||| | ||| || || ||| || ||| || |||
Sbjct 973652 GCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTC--CAAGTTCTTTTCAACACGCTTC 973595
Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666
|| |||||||| || ||||| ||||||| || | || |||| | ||||| ||
Sbjct 973594 ATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTG 973535
Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726
|| ||||| ||||| |||||||| | | || | ||||| || || || ||
Sbjct 973534 CCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAG 973475
Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786
|| || | |||| || || || ||||| |||||||| | ||||||||||||||| ||
Sbjct 973474 ATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTG 973415
Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846
| |||| | ||| |||||||| |||||||| ||||| || || |||| ||| |||
Sbjct 973414 AACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAG 973355
Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906
|| ||||| || | | ||| || || || ||||| || || || |
Sbjct 973354 CCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATG 973295
Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966
||||| |||| ||||| ||||| ||||| || ||||| ||| |||||| | |
Sbjct 973294 GCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAAG 973235
Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026
|| || |||| || || || ||||| || |||| || || || |||||
Sbjct 973234 AAGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCATGG 973175
Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCA 77082
||||| | || || | || |||||||| || | || || || || ||
Sbjct 973174 GTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCATCTCCC 973115
Query 77083 TTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATT 77142
|||| || |||| || ||||| | ||| ||||| || || || ||| ||||
Sbjct 973114 CAGATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCC 973059
Query 77143 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 77202
|| | |||| | |||||| ||||||||| || || || || || | ||| ||
Sbjct 973058 ATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAA 972999
Query 77203 GTCTCTTTCGTAAATAATA 77221
||||| ||||| | ||||
Sbjct 972998 GTCTCGATCGTAGACAATA 972980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712933838564160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |