Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03- 07] 63 sequences; 38,329,450 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq4 188 1e-42 >seq4 Length=2906552 Score = 188 bits (208), Expect = 1e-42 Identities = 1183/1879 (63%), Gaps = 50/1879 (3%) Strand=Plus/Minus Query 75373 CAACG-TGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTT 75431 ||||| |||| ||||| |||| | || | | ||||| || |||||||| || || | Sbjct 974838 CAACGGTGAATTGAATAGGAGCAGCCGCGGCCTGAGTACGCAGGTAGTACATGCCGGTCT 974779 Query 75432 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGG 75491 | ||||| || |||| || ||| |||||||| || | ||| | ||||| Sbjct 974778 TGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGATCCT 974719 Query 75492 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 75551 || || || |||| ||||| ||||| |||||||| || | |||||| ||||| | Sbjct 974718 TCATGTGGATGTTCAGGGACTGGGACTGATCAATGAAAGCACCACGATCAGCTGCCATCT 974659 Query 75552 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 75611 | ||| |||| ||| ||||| | || ||| ||| |||||||| || | Sbjct 974658 GGACAATTTGGCGCTGAGAAATCTCCCAGACGGTCTTGTAAAGGGCCTTGATATCTTCGG 974599 Query 75612 GAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCAT 75668 | | || | | || |||||||| ||| |||| || || ||||| || ||| Sbjct 974598 GGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCATGGCAT 974539 Query 75669 CATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATT 75728 | ||| | | ||| | | | || || || || |||| ||| || | Sbjct 974538 CGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACTTGGAACT 974479 Query 75729 CTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGT 75788 | || | | || | ||| ||| || || || || || || | | || |||| Sbjct 974478 CGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGT 974419 Query 75789 TTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGA 75848 | |||| ||| || | || ||||| |||||||| || | | || || || | Sbjct 974418 TGCCCAGAATCTGGGACGTACTGGCAGTTGGCATAGGGGCGAGGAGCAAGCTGTTGCGCG 974359 Query 75849 GACCATGTGTTC--TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTAC 75906 ||| ||| || |||| | || || || | | ||| ||||| || || || || Sbjct 974358 TACC--GTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAGGTCAGAGGGCTT 974301 Query 75907 AACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTC 75966 |||||||| | ||| |||| || || || | | ||| |||||| || ||| ||| Sbjct 974300 GACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAATGATTC 974241 Query 75967 GTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGT 76026 ||| | || ||| | || | || | ||||| | || | | || || || Sbjct 974240 GTAGGGACCCTCCACCTTGGCGATCTCCATAGAAGCCTCAAGGGCCGCATGGTAGATGGT 974181 Query 76027 TTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAG 76086 || || |||| ||| || || | | || || || ||||| || ||| | | Sbjct 974180 CTCAAAGATCTGCTTGTTCAGCTGACGAGCCTCGGGAGACTCAAAGGGC--ATGCGCAGG 974123 Query 76087 --AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 76144 || || || || || || ||||| || |||| |||||| |||| || | | | ||| Sbjct 974122 GCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATGGGTCGGTGGCGCATGTTG 974063 Query 76145 GAAATTTCAG--CTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTC 76202 || | | || ||||| |||||| | ||| | ||| || || || ||||| || | Sbjct 974062 CTG-TTGCGGGCCTCCTGGAC-AGGGTAGTGATTGACATCAATGATCTTGTTGAGGTTGC 974005 Query 76203 TGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCT-----AT 76257 |||||| || || || || | || || ||| ||| | || || || Sbjct 974004 GGACAACCACCTTGGTGACTTCATGAAGCTTCTTAAAGTCATAGCAGCCTTCGTTGTAAT 973945 Query 76258 C-ACAAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGG 76316 | ||| | | || || | ||| || | || ||||| || ||||||| | | | Sbjct 973944 CGACATAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCAAACAGCAACCTCATCTGGA---G 973888 Query 76317 CA---TATTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTT 76373 || || | || ||||| ||||| || || | ||| ||||| || || | | Sbjct 973887 CACAGTACTCGATAATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTCT 973828 Query 76374 GGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCT 76433 |||||||||| ||| || | ||||| || || | || || | ||||| ||| ||| Sbjct 973827 GGTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCT 973768 Query 76434 GTGATTCGATAATAGATTTCCAGACGACTCTAG-CTTTTATTATAGATTTGTATCGCTTC 76492 | | ||| | || || | ||| | | ||| | | || | | | | | | || Sbjct 973767 GGGCTTCCAGGATGGAATACCACA-GCTTCTGGGCGCGGATGGTCG--TGCGACCACGTC 973711 Query 76493 TCTCTTTC--ATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAA-CA-TCATCCAA 76548 ||| ||| ||| | ||| || || ||||| ||| ||| | || ||| | | Sbjct 973710 CCTCCTTCTCATACTTCTCATACAAAGCCTCGAATTC--CTCGCCATAGCAGTCAGCAAG 973653 Query 76549 ACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT--AACCCGTTTC 76606 ||||| ||||| || || ||||||| | ||| || || ||| || ||| || ||| Sbjct 973652 GCCAGGGCATTCGTTGGGGCACATCAGCGTCCAGTC--CAAGTTCTTTTCAACACGCTTC 973595 Query 76607 ATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTT 76666 || |||||||| || ||||| ||||||| || | || |||| | ||||| || Sbjct 973594 ATGAAGAGATCGGGAATCCAGAGAGCAAGGAACAAGTCACGGGCGCGGACCTCTTCCTTG 973535 Query 76667 CCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATAT 76726 || ||||| ||||| |||||||| | | || | ||||| || || || || Sbjct 973534 CCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAG 973475 Query 76727 ATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTA 76786 || || | |||| || || || ||||| |||||||| | ||||||||||||||| || Sbjct 973474 ATGGCAAAGGCACCAGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTG 973415 Query 76787 TAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTT 76846 | |||| | ||| |||||||| |||||||| ||||| || || |||| ||| ||| Sbjct 973414 AACACTCGAAGCATGGGAATAATACCGTTAGAGGTACCGTTGGTGCCAGCAATGTAAGAG 973355 Query 76847 CCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGA 76906 || ||||| || | | ||| || || || ||||| || || || | Sbjct 973354 CCGGTGGCACGGATGCGGTGGACGTTCAAGCCAATACCACCAGCCATCTTGGAAATCATG 973295 Query 76907 GCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGA 76966 ||||| |||| ||||| ||||| ||||| || ||||| ||| |||||| | | Sbjct 973294 GCACATGTCTTCAGAGTGTCGTAGATACCCTCAATGCTATCGTCCTTCATGTCGACCAAG 973235 Query 76967 AAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGA 77026 || || |||| || || || ||||| || |||| || || || ||||| Sbjct 973234 AAGCATGAGGACAGCTGGGCCTGCGGGGTACCTGCGTTGAACAGGGTGGGGGAGGCATGG 973175 Query 77027 GTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCA 77082 ||||| | || || | || |||||||| || | || || || || || Sbjct 973174 GTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCATCTCCC 973115 Query 77083 TTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATT 77142 |||| || |||| || ||||| | ||| ||||| || || || ||| |||| Sbjct 973114 CAGATG----CCAACAGACACTCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCC 973059 Query 77143 ATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAA 77202 || | |||| | |||||| ||||||||| || || || || || | ||| || Sbjct 973058 ATCAAGCTTCAGAAGGTATGACCGTTCCAAAGTCTTGAAGCCGAAGTATTGGTAGTTGAA 972999 Query 77203 GTCTCTTTCGTAAATAATA 77221 ||||| ||||| | |||| Sbjct 972998 GTCTCGATCGTAGACAATA 972980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933838564160