Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20guizhouense_20[genbank_20GCA_5F002022785.1_202017-03-
07] 63 sequences; 38,329,450 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq7 141 7e-29
seq2 113 3e-20
seq3 109 4e-19
>seq7
Length=2414983
Score = 141 bits (156), Expect = 7e-29
Identities = 170/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || |||||||| || || |||||| ||||||||||| |||| |
Sbjct 819906 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 819847
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230
|| || | || ||||||||||| || || |||||||| |||||||| || | ||
Sbjct 819846 AGGGTTCGGCCATCCTCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGA 819787
Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCA 44288
| || ||||| ||| ||||| ||| || ||| | |||||||||| || ||||
Sbjct 819786 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT--CGATGGTGTCGGAAGACTCCA 819729
Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| | || |||||||| |||||||||||||| ||||| || |||||
Sbjct 819728 CCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 819680
Score = 134 bits (148), Expect = 1e-26
Identities = 161/215 (75%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGC--GAGTTGGCGCTCGTCGT 44186
|||||||| || ||| |||||| ||||||||||| |||| ||||| | || | || |
Sbjct 116142 ACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCG-GC-CATCCT 116085
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| || ||||| || || || |||| ||||||||| || | ||| | || ||||| |||
Sbjct 116084 CGAGTTGCTTGCCAGCGAAAATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCT 116025
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||||| | | ||||| |||| || |||||||| | || || ||||
Sbjct 116024 GGATCTTGGACTTCACATTGTCGATGGTATCGGAAGACTCCACCTCGAGGGTGATGGTCT 115965
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
| || ||||||||||| ||||||||||||||| ||
Sbjct 115964 TGCCGGTGAGGGTCTTGACGAAGATTTGCATGGTG 115930
Score = 104 bits (114), Expect = 2e-17
Identities = 101/126 (80%), Gaps = 3/126 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187
|||| ||| || ||||||||||| ||||||||||| ||| | || || || |||| ||
Sbjct 116527 ACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTG-CGACCGTCTTC 116469
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
||||||||| || ||||||||||| |||||||| || | ||| | ||| ||||| ||| |
Sbjct 116468 CAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC-T 116410
Query 44248 TATCTT 44253
|||||
Sbjct 116409 GATCTT 116404
>seq2
Length=3541710
Score = 113 bits (124), Expect = 3e-20
Identities = 136/183 (74%), Gaps = 4/183 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| || ||| | || || |||||||| || |||||||
Sbjct 89114 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGA 89055
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
|||| |||||||| || | || | || ||||| ||| ||||| ||| || |||
Sbjct 89054 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 88995
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || ||||||| ||| || ||||| | || || ||||| ||||| |||||||||||
Sbjct 88994 --CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 88937
Query 44326 GAA 44328
|||
Sbjct 88936 GAA 88934
>seq3
Length=3158035
Score = 109 bits (120), Expect = 4e-19
Identities = 145/199 (73%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 44140 CGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCC 44198
|||||||| ||| ||||||||||| ||| | || || | |||| ||||||||||| |
Sbjct 1903390 CGTGCTCTTCTTCTGGATGTTGTAGTCGCTCAAGGTGTGAC-CGTCTTCCAGCTGCTTAC 1903448
Query 44199 CGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCT 44258
| || ||||| || |||||||| || | || | || || || ||| ||||| ||
Sbjct 1903449 CAGCGAAGATTAAGCGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCCTGAATCTTGGACT 1903508
Query 44259 TCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGG 44318
| | | | |||||||||| |||||||||| | ||||| ||||| || ||||| |
Sbjct 1903509 TGACGTTGTCGATGGTGTCGGAAGATTCCACCTTAAGGGTAATTGTCTTGCCGGTGAGAG 1903568
Query 44319 TCTTCACGAAGATTTGCAT 44337
|||| ||||| || || ||
Sbjct 1903569 TCTTGACGAAAATCTGTAT 1903587
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359990123594871
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |