Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq363 95.1 1e-14 >seq363 Length=36312 Score = 95.1 bits (104), Expect = 1e-14 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 20936 GTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCC 20995 ||||| | |||| ||||| ||||| |||| | ||| | | ||| || ||| | Sbjct 13418 GTGGTCGATGTAGACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATC 13477 Query 20996 CGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCC 21055 |||||||||| || | || || || || |||||||||||||| || |||| || Sbjct 13478 GCACACGTGAGCGAGCATGTGTGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCC 13537 Query 21056 GAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 ||||||||||||| ||||| |||||| ||||||||| Sbjct 13538 GAGGCCCATGTCGCAGGACCGCTGGTATAGCTGGCAG 13574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427767804346560