Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq141 111 1e-19
>seq141
Length=79513
Score = 111 bits (122), Expect = 1e-19
Identities = 123/162 (76%), Gaps = 4/162 (2%)
Strand=Plus/Minus
Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA--GTTGAACA 5651
||||| || |||||||||||| ||| | |||| | ||| | | ||| | |||||| |
Sbjct 35712 AGCTGGGCAATTCGGTCGCCCTCCTTGATCTCGTAGTCGGTTT--CCGCATGGTTGAAGA 35655
Query 5652 GCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGA 5711
| | || ||| |||||||||||||||||| || ||||| ||||| ||||||||
Sbjct 35654 GAAGAACCTTGACGGGGCCGCGGTAGTCGGCGTCGATGACGCCTGCGCCAGTGTCGATGA 35595
Query 5712 AGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753
|||||||| ||| ||||| |||||||| || | |||||||
Sbjct 35594 AGTGCTTGGACGCAAGGCCAGAGCGGGGGGCAATACGGCCGT 35553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430046160695264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |