Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq141 111 1e-19 >seq141 Length=79513 Score = 111 bits (122), Expect = 1e-19 Identities = 123/162 (76%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAA--GTTGAACA 5651 ||||| || |||||||||||| ||| | |||| | ||| | | ||| | |||||| | Sbjct 35712 AGCTGGGCAATTCGGTCGCCCTCCTTGATCTCGTAGTCGGTTT--CCGCATGGTTGAAGA 35655 Query 5652 GCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGA 5711 | | || ||| |||||||||||||||||| || ||||| ||||| |||||||| Sbjct 35654 GAAGAACCTTGACGGGGCCGCGGTAGTCGGCGTCGATGACGCCTGCGCCAGTGTCGATGA 35595 Query 5712 AGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 |||||||| ||| ||||| |||||||| || | ||||||| Sbjct 35594 AGTGCTTGGACGCAAGGCCAGAGCGGGGGGCAATACGGCCGT 35553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430046160695264