Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq363 89.7 3e-13
>seq363
Length=36312
Score = 89.7 bits (98), Expect = 3e-13
Identities = 148/207 (71%), Gaps = 5/207 (2%)
Strand=Plus/Plus
Query 25388 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447
||| || || | ||||| | ||| ||||| ||||| || | || | ||| || | |||
Sbjct 13370 GGGGAACGGCCGAGGCTCACGCTCCAGCTGCGTCTTGAGAGCGTCGATGTGGTCGATGTA 13429
Query 25448 GACGTGAGCGTCTCCCA-GA-GTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAA 25505
|||||| |||||||||| || ||| || | || ||| || | || || |||| |
Sbjct 13430 GACGTGTGCGTCTCCCATGACGTG-GGTGAGGCT-TCCGGGCACCAGATCGCACACGTGA 13487
Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565
|| | ||||| ||||| || |||||||||||||| ||||| | |||| ||||||
Sbjct 13488 GCGAGCATGTGTGTGAGCAGCGCATAGCTGGCGATGTTGAAGGGGATGCCGAGGCCCATG 13547
Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACA 25592
| | | |||| |||||| ||||| ||
Sbjct 13548 T-CGCAGGACCGCTGGTATAGCTGGCA 13573
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340131083388756
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |