Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq330 86.0 5e-12
>seq330
Length=39978
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| || | ||| ||||| |||| || || |||||||||||||| |||||||| || |
Sbjct 14742 CCACCACGCAGACGCAGGACCAAGTGCAGTGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 14801
Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020
|| || |||| |||| ||||| || ||||| |||| ||||||||| || ||
Sbjct 14802 AAGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGA 14861
Query 34021 ACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCAT 34080
| || ||| |||||| ||| || ||| | | | | || | ||||||
Sbjct 14862 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACC 14921
Query 34081 TCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|||| || ||||| || ||||| || || || || || || |||||
Sbjct 14922 TCGAGGGTGATTGTCTTGCCGGTCAGAGTCTTGACGAAAATCTGCAT 14968
Score = 82.4 bits (90), Expect = 6e-11
Identities = 99/135 (73%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || || || ||||| |||||||||||||| |||||||| || ||| ||
Sbjct 14979 AGACGGAGGACAAGGTGAAGTGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGA 15038
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
|||| || | |||||||| ||||| || || |||||||||||| || | | |||
Sbjct 15039 CCGTCCTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCCGGGGGAATACCCTCC 15098
Query 34030 TTGTCCATAATTTTT 34044
|||||| ||| |||
Sbjct 15099 TTGTCCTGAATCTTT 15113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397054792780744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |