Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq330 100 3e-16
seq301 96.9 3e-15
>seq330
Length=39978
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || ||||| || || || || ||||| || ||| | ||
Sbjct 14968 ATGCAGATTTTCGTCAAGACTCTGACCGGCAAGACAATCACCCTCGAGGTGGAATCTTCC 14909
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 14908 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 14849
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||| || || |||||||| || | | | || || || |||
Sbjct 14848 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGAGCGACTACAAC 14789
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| ||||| |||||||| |||| |||| || |||
Sbjct 14788 ATCCAGAAGGAGAGCACACTGCACTTGGTCCTGCGTCTGCGTGGTGGC 14741
Score = 82.4 bits (90), Expect = 7e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || ||| | ||||| || || || || | || || ||| | |
Sbjct 15196 ATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACATTGGAGGTTGAATCATCA 15137
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||| || ||||| || || || || || |||||
Sbjct 15136 GACACCATCGACAATGTCAAATCAAAGATTCAGGACAAGGAGGGTATTCCCCCGGATCAG 15077
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA 24858
|| ||| | |||||||| || || ||||| |||||
Sbjct 15076 CAGCGTCTTATCTTTGCTGGCAAGCAGCTTGAGGA 15042
>seq301
Length=43884
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || || || || || || || || || || || | |
Sbjct 7735 GATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 7676
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 7675 CGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 7616
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||||||| || || || |||||||||||| ||| | || || || ||
Sbjct 7615 GCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGAACTCTCTCCGACTACAA 7556
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || || ||| |||| |||| |||| || ||
Sbjct 7555 CATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGG 7508
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449888759512160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |