Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq546 138 9e-28 >seq546 Length=20258 Score = 138 bits (152), Expect = 9e-28 Identities = 201/284 (71%), Gaps = 0/284 (0%) Strand=Plus/Minus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 ||||||||| |||||| ||||| || ||||||| | ||| ||| ||||||| |||| Sbjct 4809 ACAAACTTGTTGATGAAGCCATCGAGGTGGTCCTGCAGCTTTGCGGCATCGTGGGCGCCG 4750 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || |||| ||| |||| | || || || ||||||||| | || Sbjct 4749 TTGATGATCCAACGGTCGTCCTTGGGGTCGATGTTGGTCTGAGCTCCCAGCTCGAAACCA 4690 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 |||||||| | ||| | || || |||| | || ||||| || || |||| Sbjct 4689 AAGTACTTGATGACATAAGAACCGGGGCGGGCAAGAGACTGGGCGACGCTGGACAAGTTG 4630 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590 |||| || |||||||| ||||| ||||| ||||| | ||||| || |||| ||| Sbjct 4629 ACGACAACGGTCTTGATACCGTTACCCTTGCCTTCAATCTTGGTCTGGAGGCGCTCCATC 4570 Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCAC 34634 |||||||||||||| || || |||| ||| |||||| || Sbjct 4569 TTGTAGCGGTAGAAGGCATCGCTGACATCGCGACGAACGTTGAC 4526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412833690470996