Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq546 138 9e-28
>seq546
Length=20258
Score = 138 bits (152), Expect = 9e-28
Identities = 201/284 (71%), Gaps = 0/284 (0%)
Strand=Plus/Minus
Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410
||||||||| |||||| ||||| || ||||||| | ||| ||| ||||||| ||||
Sbjct 4809 ACAAACTTGTTGATGAAGCCATCGAGGTGGTCCTGCAGCTTTGCGGCATCGTGGGCGCCG 4750
Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470
|||| ||| | || |||| ||| |||| | || || || ||||||||| | ||
Sbjct 4749 TTGATGATCCAACGGTCGTCCTTGGGGTCGATGTTGGTCTGAGCTCCCAGCTCGAAACCA 4690
Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530
|||||||| | ||| | || || |||| | || ||||| || || ||||
Sbjct 4689 AAGTACTTGATGACATAAGAACCGGGGCGGGCAAGAGACTGGGCGACGCTGGACAAGTTG 4630
Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590
|||| || |||||||| ||||| ||||| ||||| | ||||| || |||| |||
Sbjct 4629 ACGACAACGGTCTTGATACCGTTACCCTTGCCTTCAATCTTGGTCTGGAGGCGCTCCATC 4570
Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCAC 34634
|||||||||||||| || || |||| ||| |||||| ||
Sbjct 4569 TTGTAGCGGTAGAAGGCATCGCTGACATCGCGACGAACGTTGAC 4526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412833690470996
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |