Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06] 1,572 sequences; 39,721,542 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq322 91.5 6e-13 >seq322 Length=40969 Score = 91.5 bits (100), Expect = 6e-13 Identities = 120/163 (74%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||||| |||||||| || |||||||| |||||||||||| ||||| Sbjct 31248 CTCAATCAAGTGAGCGATTGTCATACGGGACGGAATGGCGTGAGGGTTGATGATGATGTC 31189 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802 || | | || ||| |||| ||||| || |||| |||| | | | ||||| Sbjct 31188 TGGAGTGACACCTTCTCTTG---TGAAGGGCATGTCCTCTTGTCGGTA-AGTGACACCAA 31133 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||||||| |||| | || || |||||||| ||||| Sbjct 31132 TAGTGCCCTTTTGACCGTGACGAGAGGCGAACTTGTCTCCAAT 31090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951935084795616