Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20harzianum_20[genbank_20GCA_5F000988865.1_202015-05-06]
1,572 sequences; 39,721,542 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq330 104 2e-17
>seq330
Length=39978
Score = 104 bits (114), Expect = 2e-17
Identities = 157/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATC-CGCAATGGTGCGAG 29629
||| || || | ||||| ||| || || || ||||| || || | ||| |||||||
Sbjct 14981 ACGGAGGACAAGGTGAAGTGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAA-GGTGCGAC 15039
Query 29630 AATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTT 29689
|| || || || ||||||||| | || | | ||||||||||| ||||||||||| |
Sbjct 15040 CGTCCTCAAGCTGCTTGCCAGCAAAGATAAGACGCTGCTGATCCGGGGGAATACCCTCCT 15099
Query 29690 TGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTT 29748
|||| || ||| |||| ||||||| | || | ||||| || ||| || || | ||
Sbjct 15100 TGTCCTG-AATCTTTGATTTGACATTGTCGATGGTGTCTGATGATTCAACCTCCAATGTG 15158
Query 29749 ATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || ||||| || || || || || || ||||||||
Sbjct 15159 ATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 15196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385211819681652
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |